Miyakogusa Predicted Gene
- Lj0g3v0306579.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0306579.1 Non Chatacterized Hit- tr|D7TFE1|D7TFE1_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,72.73,0,coiled-coil,NULL; seg,NULL; PRONE,Plant specific Rop
nucleotide exchanger, PRONE; SUBFAMILY NOT NAME,CUFF.20659.1
(1332 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS331337 similar to UniRef100_A7QKP4 Cluster: Chromosom... 946 0.0
gnl|LJGI|FS335253 similar to UniRef100_A7QKP4 Cluster: Chromosom... 539 e-152
gnl|LJGI|TC64906 similar to UniRef100_A7QKP5 Cluster: Chromosome... 88 2e-16
>gnl|LJGI|FS331337 similar to UniRef100_A7QKP4 Cluster: Chromosome chr2 scaffold_113,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_113, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (43%)
Length = 752
Score = 946 bits (477), Expect = 0.0
Identities = 480/481 (99%)
Strand = Plus / Plus
Query: 1 atgctgctgattagaaaaagactaacttgctgcgccagggaaaccaaaattagcattgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 atgctgctgattagaaaaagactaacttgctgcgccagggaaaccaaaattagcattgat 331
Query: 61 tatgacgagccagataggattatgacatataatggccttgagggttgcattcttgataat 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 332 tatgacgagccagataggattatgacatataatggccttgagggctgcattcttgataat 391
Query: 121 caatcttatgaagatgaaagcagaactagtagaggagatggatgtataactgattcattc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 caatcttatgaagatgaaagcagaactagtagaggagatggatgtataactgattcattc 451
Query: 181 aatgacgatgactccagttgttcatccagtaaagatgcttttgattcattctcttcgaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 aatgacgatgactccagttgttcatccagtaaagatgcttttgattcattctcttcgaaa 511
Query: 241 tgtttgccaatgaaaagggatgaacatggattggaagattgggaactctcagaaagccct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 tgtttgccaatgaaaagggatgaacatggattggaagattgggaactctcagaaagccct 571
Query: 301 caacatttttatatgaaagagaagcctgcatctaccgtccaatattcagatgtagaagcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 caacatttttatatgaaagagaagcctgcatctaccgtccaatattcagatgtagaagcc 631
Query: 361 atgaaagaaaagtttgcaaagctgttgctaggtgatgatgttacaggaggaactaagggc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 atgaaagaaaagtttgcaaagctgttgctaggtgatgatgttacaggaggaactaagggc 691
Query: 421 tctaacacagctttagcactgtccaatgccatcactaacctagcagtgacggttttcggt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 tctaacacagctttagcactgtccaatgccatcactaacctagcagtgacggttttcggt 751
Query: 481 g 481
|
Sbjct: 752 g 752
>gnl|LJGI|FS335253 similar to UniRef100_A7QKP4 Cluster: Chromosome chr2 scaffold_113,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_113, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (63%)
Length = 764
Score = 539 bits (272), Expect = e-152
Identities = 642/764 (84%), Gaps = 6/764 (0%)
Strand = Plus / Plus
Query: 84 gacatataatggccttgagggttgcattcttgataatcaatcttatgaagatgaaagcag 143
|||||| |||||||||||| |||||||| | | ||||| ||||||||||| || |||||
Sbjct: 1 gacatacaatggccttgagagttgcattttaaacaatcagtcttatgaagaagagagcag 60
Query: 144 aactagtagaggagatggatgtataactgattcattcaatgacgatgactccagttgttc 203
|||||||||||||||||| ||||||||||||||||| |||| || || |||||||||||
Sbjct: 61 aactagtagaggagatgggtgtataactgattcatttgatgaagacgattccagttgttc 120
Query: 204 atccagtaaagatgcttttgattcattctcttcgaaatgtttgccaatgaaaagggatga 263
|| || |||||||||| || ||||||||||| || |||||| ||||||||| |||||
Sbjct: 121 ctctagcaaagatgcttctggatcattctcttcaaattgtttgagaatgaaaagagatga 180
Query: 264 acatggattggaagattgggaactctcagaaagccctcaacatttttatatgaaagagaa 323
| | ||||||||||| ||| || |||| |||| ||||||| ||||||| ||||||||
Sbjct: 181 aaagggattggaagaatggaaagtctctcaaagtcctcaacgtttttatgccaaagagaa 240
Query: 324 g---cctgcatctaccgtccaatattcagatgtagaagccatgaaagaaaagtttgcaaa 380
| ||||| | | | | ||| |||||||| ||||||||||||| || || ||| ||||
Sbjct: 241 gaagcctgcttatgtcatgcaacattcagatatagaagccatgaaggagaaattttcaaa 300
Query: 381 gctgttgctaggtgatgatgttacaggaggaactaagggctctaacacagctttagcact 440
||| |||||||| || |||||||||||||||||||||||| | ||||||||| || ||
Sbjct: 301 gctcttgctaggggaagatgttacaggaggaactaagggcctcagcacagctttggctct 360
Query: 441 gtccaatgccatcactaacctagcagtgacggttttcggtgagttgtggaaattggaacc 500
||| ||||||||||| ||||| || || |||||||| |||||| | ||||||||||||||
Sbjct: 361 gtctaatgccatcacaaaccttgcggtaacggtttttggtgagctatggaaattggaacc 420
Query: 501 tctatctgaagaaaggaagaacaaatggcgaagagaaatggactggtttctgtctcctac 560
| ||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 421 tttatgtgaagaaaggaagaacaaatggcgaagagaaatggagtggttactgtctcctac 480
Query: 561 caactatatggttgaactagttcctgctaagcaaaatggtgctaatggag---ggatctt 617
||||||||||||||||| |||||||||||||||| |||| ||||| | |||||||
Sbjct: 481 taactatatggttgaacttgttcctgctaagcaaatcagtgccaatggtgggaggatctt 540
Query: 618 tgagataatgactccaaaagcccgggcagacatcggcatgaatcttccagcacttcacaa 677
|||||| ||||| || ||||| || ||||||||| |||||||||||| || ||||| ||
Sbjct: 541 tgagattatgaccccgaaagctcgtgcagacatccacatgaatcttccggcgcttcagaa 600
Query: 678 gttggactctatgcttattgaggctcttgactcaatggtgcataccgagttttgctatgc 737
||| ||||||||||||||||||||| | || || |||||| |||| |||||||| |||||
Sbjct: 601 gttagactctatgcttattgaggctttagattctatggtggatacagagttttggtatgc 660
Query: 738 caagggagcaagccaggcagaagggaggaacacaagtggaaaacaaagcaaaagatggtg 797
|||||| ||||| || |||||||||||| | |||| | || ||| || |||||||
Sbjct: 661 tgagggaggaagccgtgccgaagggaggaactcgagtgcacggcatagccaacgatggtg 720
Query: 798 gcttccatcaccccaagtaccagcaactgggctttctgacactg 841
|||||||||||||||||||||| || ||| |||||||| ||||
Sbjct: 721 gcttccatcaccccaagtaccaaaaaatggcctttctgatactg 764
>gnl|LJGI|TC64906 similar to UniRef100_A7QKP5 Cluster: Chromosome chr2 scaffold_113,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_113, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (44%)
Length = 710
Score = 87.7 bits (44), Expect = 2e-16
Identities = 83/96 (86%)
Strand = Plus / Plus
Query: 1220 tggaccgtgcagaaacacttataaagcagcttaaaaccgaatacccaaatcttcctcaaa 1279
||||||||||||||||||| || ||| |||||||| | || |||||| ||||||| ||
Sbjct: 109 tggaccgtgcagaaacactcttacagctgcttaaaatcagattcccaaaccttcctccaa 168
Query: 1280 catttctggatgctgcaaaagttcaatatggcaagg 1315
||||||| |||||| | |||||||||||||||||||
Sbjct: 169 catttctagatgctactaaagttcaatatggcaagg 204