Miyakogusa Predicted Gene
- Lj0g3v0306549.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0306549.1 tr|A9TLR6|A9TLR6_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_108397,35.15,7e-17,no description,YqgF/RNase H-like
domain; Likely ribonuclease with RNase H fold.,YqgF/RNase H-like
do,CUFF.20657.1
(636 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BW603865 weakly similar to UniRef100_A7QIV9 Cluster: Ch... 922 0.0
gnl|LJGI|FS332288 111 5e-24
>gnl|LJGI|BW603865 weakly similar to UniRef100_A7QIV9 Cluster: Chromosome chr2
scaffold_105, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr2 scaffold_105, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (73%)
Length = 473
Score = 922 bits (465), Expect = 0.0
Identities = 471/473 (99%)
Strand = Plus / Plus
Query: 25 aaattcggtgacacttccgattcactgctctatcggcggcggcggcgacggcgcattctg 84
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaattcggtgacacttccgattcactgctctatcggcggcggcggcgacggcgcattctg 60
Query: 85 ccacaacacacgacgagttcggcaacgggtgaaatgaggttcgtgcagccattgcaattg 144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccacaacacacgacgagttcggcaacgggtgaaatgaggttcgtgcagccattgcaattg 120
Query: 145 ttccataatttggccaaggcaacccagaaggaacgtggaaggttgattggtttagacgtt 204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttccataatttggccaaggcaacccagaaggaacgtggaaggttgattggtttagacgtt 180
Query: 205 ggtgataaatatgttggcgttgctctttctgattttgataacaaaattgcctcacctttc 264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggtgataaatatgttggcgttgctctttctgattttgataacaaaattgcctcacctttc 240
Query: 265 agtgttctgatcaggaagaagtcaaatattgggttaatggcttctgattttgagaccctg 324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agtgttctgatcaggaagaagtcaaatattgggttaatggcttctgattttgagaccctg 300
Query: 325 atatctaaatactccttgaagggctttgttattggaatcccttttaacaactttcgggtg 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atatctaaatactccttgaagggctttgttattggaatcccttttaacaactttcgggtg 360
Query: 385 tctcctgatgctgtacaagtgaaagtcttgattgatgccctcagtaaaaccaaaaagctt 444
||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 361 tctcctgatgctgtacaagtgaaggtcttgattgatgccctcagtaaaaccaagaagctt 420
Query: 445 gaaggtctaaattatacgtattggaatgagtgcttcacctcacagaatgttgg 497
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gaaggtctaaattatacgtattggaatgagtgcttcacctcacagaatgttgg 473
>gnl|LJGI|FS332288
Length = 749
Score = 111 bits (56), Expect = 5e-24
Identities = 56/56 (100%)
Strand = Plus / Plus
Query: 581 aggggtacctggattatgttaacagaaaaatgaggcagcaagcaacacaatgatgt 636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 aggggtacctggattatgttaacagaaaaatgaggcagcaagcaacacaatgatgt 545