Miyakogusa Predicted Gene

Lj0g3v0306279.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0306279.1 tr|F4HV88|F4HV88_ARATH Ribosomal protein L18ae
family protein OS=Arabidopsis thaliana GN=At1g54217 P,59.38,2e-19,60S
RIBOSOMAL PROTEIN L18A-RELATED,NULL; 60S RIBOSOMAL PROTEIN
L18A,Ribosomal protein L18a; seg,NULL,CUFF.20635.1
         (294 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO011707                                                      68   3e-11
gnl|LJGI|TC62633                                                       68   3e-11
gnl|LJGI|TC61350                                                       68   3e-11

>gnl|LJGI|GO011707 
          Length = 723

 Score = 67.9 bits (34), Expect = 3e-11
 Identities = 103/126 (81%)
 Strand = Plus / Plus

                                                                       
Query: 75  tgacaagccacttccatgttttggttgtggaattggatggttctcttttctgcttggatt 134
           |||||| || || |||||||||||||| ||| ||||||||||||| |||||   ||||||
Sbjct: 361 tgacaaacctctcccatgttttggttgcggagttggatggttctcatttctttgtggatt 420

                                                                       
Query: 135 tgcgttcccactgatgtggtattatgctacaattctctactttggaaattactatcgcaa 194
           |   |  ||||   ||||||| || || ||||| ||||| |||||||||||||| |||||
Sbjct: 421 tttatgtccacctctgtggtactacgcaacaatcctctattttggaaattactaccgcaa 480

                 
Query: 195 ggatcc 200
           ||||||
Sbjct: 481 ggatcc 486


>gnl|LJGI|TC62633 
          Length = 903

 Score = 67.9 bits (34), Expect = 3e-11
 Identities = 103/126 (81%)
 Strand = Plus / Plus

                                                                       
Query: 75  tgacaagccacttccatgttttggttgtggaattggatggttctcttttctgcttggatt 134
           |||||| || || |||||||||||||| ||| ||||||||||||| |||||   ||||||
Sbjct: 293 tgacaaacctctcccatgttttggttgcggagttggatggttctcatttctttgtggatt 352

                                                                       
Query: 135 tgcgttcccactgatgtggtattatgctacaattctctactttggaaattactatcgcaa 194
           |   |  ||||   ||||||| || || ||||| ||||| |||||||||||||| |||||
Sbjct: 353 tttatgtccacctctgtggtactacgcaacaatcctctattttggaaattactaccgcaa 412

                 
Query: 195 ggatcc 200
           ||||||
Sbjct: 413 ggatcc 418


>gnl|LJGI|TC61350 
          Length = 841

 Score = 67.9 bits (34), Expect = 3e-11
 Identities = 103/126 (81%)
 Strand = Plus / Plus

                                                                       
Query: 75  tgacaagccacttccatgttttggttgtggaattggatggttctcttttctgcttggatt 134
           |||||| || || |||||||||||||| ||| ||||||||||||| |||||   ||||||
Sbjct: 363 tgacaaacctctcccatgttttggttgcggagttggatggttctcatttctttgtggatt 422

                                                                       
Query: 135 tgcgttcccactgatgtggtattatgctacaattctctactttggaaattactatcgcaa 194
           |   |  ||||   ||||||| || || ||||| ||||| |||||||||||||| |||||
Sbjct: 423 tttatgtccacctctgtggtactacgcaacaatcctctattttggaaattactaccgcaa 482

                 
Query: 195 ggatcc 200
           ||||||
Sbjct: 483 ggatcc 488