Miyakogusa Predicted Gene
- Lj0g3v0306109.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0306109.1 tr|B9IQ74|B9IQ74_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_665652 PE=4
SV=1,35.19,6e-18,FAMILY NOT NAMED,NULL; Leucine-rich repeats, typical
(most populate,Leucine-rich repeat, typical sub,CUFF.20620.1
(2190 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60303 similar to UniRef100_Q75WU3 Cluster: Leucine-ri... 642 0.0
gnl|LJGI|FS321801 weakly similar to UniRef100_A7PFM0 Cluster: Ch... 375 e-103
gnl|LJGI|FS342198 weakly similar to UniRef100_A7PFL6 Cluster: Ch... 163 6e-39
gnl|LJGI|TC69011 similar to UniRef100_Q75WU3 Cluster: Leucine-ri... 119 8e-26
gnl|LJGI|TC80852 similar to UniRef100_A7PEG6 Cluster: Chromosome... 72 2e-11
gnl|LJGI|TC65506 similar to UniRef100_A7QCN9 Cluster: Chromosome... 66 1e-09
gnl|LJGI|FS323651 weakly similar to UniRef100_A7PH75 Cluster: Ch... 56 1e-06
gnl|LJGI|TC81690 similar to UniRef100_A7PSI1 Cluster: Chromosome... 56 1e-06
>gnl|LJGI|TC60303 similar to UniRef100_Q75WU3 Cluster: Leucine-rich repeat
receptor-like protein kinase 1; n=1; Populus nigra|Rep:
Leucine-rich repeat receptor-like protein kinase 1 -
Populus nigra (Lombardy poplar), partial (12%)
Length = 797
Score = 642 bits (324), Expect = 0.0
Identities = 327/328 (99%)
Strand = Plus / Plus
Query: 1860 gaaaggtagtgtggatatggttttgaaagatggtgaacaagcaggtgcatttgagtggaa 1919
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaaaggtagtgtggatatggttttgaaagatggtgaacaagcaggtgcatttgagtggaa 60
Query: 1920 taagagggtgaatgtcatcaaagatgtagccagtgctttatgctacatgcaccatgattg 1979
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 taagagggtgaatgtcatcaaagatgtagccagtgctttatgctacatgcaccatgattg 120
Query: 1980 ctcaccacctatcgttcatcgagatatatcaagcaagaatgttctattggattcagaata 2039
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctcaccacctatcgttcatcgagatatatcaagcaagaatgttctattggattcagaata 180
Query: 2040 tgtggctcatatctcagacttcggaacagctaagcttctgaatcctaattcaactaattg 2099
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 181 tgtggctcatatctcagacttcgggacagctaagcttctgaatcctaattcaactaattg 240
Query: 2100 gaccacatttgcaggcacctttggatacgctgctccagaacttgcctacacaatggaagt 2159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaccacatttgcaggcacctttggatacgctgctccagaacttgcctacacaatggaagt 300
Query: 2160 aaatgagaaatgtgatgtctatagtttt 2187
||||||||||||||||||||||||||||
Sbjct: 301 aaatgagaaatgtgatgtctatagtttt 328
>gnl|LJGI|FS321801 weakly similar to UniRef100_A7PFM0 Cluster: Chromosome chr11
scaffold_14, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_14, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (12%)
Length = 698
Score = 375 bits (189), Expect = e-103
Identities = 204/209 (97%)
Strand = Plus / Plus
Query: 1 atgatgaaaaatatttttctactggacatatccaataactttctctctggtacaatccct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 atgatgaaaaatatttttctactggacatatccaataactttctctctggtacaatccct 549
Query: 61 tctacaattggaaacttgagcaatttgcaatacctttacctttatagcaacattctcact 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 tctacaattggaaacttgagcaatttgcaatacctttacctttatagcaacattctcacc 609
Query: 121 ggttccattccccatgaagttggcaagctcttttctcttgtcacaatccaactgttaggt 180
||||||||||||||||||||||||||||||||||||||||| |||||||||||| || |
Sbjct: 610 ggttccattccccatgaagttggcaagctcttttctcttgtgtcaatccaactgtcagat 669
Query: 181 aacaagctttctgggctaatcccaccttc 209
|||||||||||||||||||||||||||||
Sbjct: 670 aacaagctttctgggctaatcccaccttc 698
Score = 85.7 bits (43), Expect = 1e-15
Identities = 49/51 (96%)
Strand = Plus / Plus
Query: 317 tatccactaactttctctctggtacaatcccttctacaattggaaatttga 367
|||||| ||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 518 tatccaataactttctctctggtacaatcccttctacaattggaaacttga 568
>gnl|LJGI|FS342198 weakly similar to UniRef100_A7PFL6 Cluster: Chromosome chr11
scaffold_14, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_14, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (15%)
Length = 612
Score = 163 bits (82), Expect = 6e-39
Identities = 82/82 (100%)
Strand = Plus / Plus
Query: 1 atgatgaaaaatatttttctactggacatatccaataactttctctctggtacaatccct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 atgatgaaaaatatttttctactggacatatccaataactttctctctggtacaatccct 590
Query: 61 tctacaattggaaacttgagca 82
||||||||||||||||||||||
Sbjct: 591 tctacaattggaaacttgagca 612
Score = 85.7 bits (43), Expect = 1e-15
Identities = 49/51 (96%)
Strand = Plus / Plus
Query: 317 tatccactaactttctctctggtacaatcccttctacaattggaaatttga 367
|||||| ||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 559 tatccaataactttctctctggtacaatcccttctacaattggaaacttga 609
>gnl|LJGI|TC69011 similar to UniRef100_Q75WU3 Cluster: Leucine-rich repeat
receptor-like protein kinase 1; n=1; Populus nigra|Rep:
Leucine-rich repeat receptor-like protein kinase 1 -
Populus nigra (Lombardy poplar), partial (17%)
Length = 866
Score = 119 bits (60), Expect = 8e-26
Identities = 231/288 (80%)
Strand = Plus / Plus
Query: 1896 acaagcaggtgcatttgagtggaataagagggtgaatgtcatcaaagatgtagccagtgc 1955
|||||||| |||||| | ||| | |||||||||||||| | |||| ||| |||| ||
Sbjct: 142 acaagcagcagcatttcattgggaaaagagggtgaatgttgtgaaaggtgtggccaacgc 201
Query: 1956 tttatgctacatgcaccatgattgctcaccacctatcgttcatcgagatatatcaagcaa 2015
||| | ||| |||||||||||||| || || ||||| |||| || || |||||||||||
Sbjct: 202 tttgtcctatatgcaccatgattgttctcctcctataattcaccgcgacatatcaagcaa 261
Query: 2016 gaatgttctattggattcagaatatgtggctcatatctcagacttcggaacagctaagct 2075
||||||||| | ||| |||||| |||||| |||| || || |||||||| ||| |
Sbjct: 262 gaatgttcttctagatcttcaatatgaagctcatgtctctgattttggaacagcaaagtt 321
Query: 2076 tctgaatcctaattcaactaattggaccacatttgcaggcacctttggatacgctgctcc 2135
|||||| ||| |||| || ||||||| ||||||||||||||||||| || || |||||
Sbjct: 322 tctgaagcctggttcacatacttggaccgcatttgcaggcacctttggttatgcagctcc 381
Query: 2136 agaacttgcctacacaatggaagtaaatgagaaatgtgatgtctatag 2183
||| || || | |||||| |||| ||||||||||||||||| |||||
Sbjct: 382 agagctcgctcagacaatgcaagtgaatgagaaatgtgatgtatatag 429
>gnl|LJGI|TC80852 similar to UniRef100_A7PEG6 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 480
Score = 71.9 bits (36), Expect = 2e-11
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 1960 tgctacatgcaccatgattgctcaccacctatcgttcatcgagatata 2007
|||||||||||||||||||| ||||| ||||| |||||||||||||||
Sbjct: 76 tgctacatgcaccatgattgttcaccccctattgttcatcgagatata 123
>gnl|LJGI|TC65506 similar to UniRef100_A7QCN9 Cluster: Chromosome chr12 scaffold_78,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_78, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 1259
Score = 65.9 bits (33), Expect = 1e-09
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 2105 catttgcaggcacctttggatacgctgctccagaacttgcctacacaatggaagtaaatg 2164
||||||||||||| | ||| || ||||||||||| ||||| |||||| ||| ||| | ||
Sbjct: 129 catttgcaggcacatatggctatgctgctccagagcttgcatacacactggcagtgactg 188
Query: 2165 agaaatgtgatgt 2177
|||||||||||||
Sbjct: 189 agaaatgtgatgt 201
>gnl|LJGI|FS323651 weakly similar to UniRef100_A7PH75 Cluster: Chromosome chr17
scaffold_16, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr17 scaffold_16, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (12%)
Length = 159
Score = 56.0 bits (28), Expect = 1e-06
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 206 cttccataggtaacttggtcaatttgga 233
||||||||||||||||||||||||||||
Sbjct: 38 cttccataggtaacttggtcaatttgga 65
>gnl|LJGI|TC81690 similar to UniRef100_A7PSI1 Cluster: Chromosome chr6 scaffold_28,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_28, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (20%)
Length = 1201
Score = 56.0 bits (28), Expect = 1e-06
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 1961 gctacatgcaccatgattgctcaccacctatcgttcatcgagat 2004
||||||||||||||||||| ||||| || || ||||||||||||
Sbjct: 204 gctacatgcaccatgattgttcaccccccattgttcatcgagat 247