Miyakogusa Predicted Gene

Lj0g3v0305129.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0305129.1 Non Chatacterized Hit- tr|F6GV56|F6GV56_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,39.02,1e-17,zinc finger,Zinc finger, C2H2-like;
ZINC_FINGER_C2H2_2,Zinc finger, C2H2; ZINC FINGER (C2H2 TYPE)
FA,CUFF.20532.1
         (1549 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BI419936 weakly similar to UniRef100_A7PDG3 Cluster: Ch...    58   2e-07

>gnl|LJGI|BI419936 weakly similar to UniRef100_A7PDG3 Cluster: Chromosome chr17
           scaffold_12, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr17 scaffold_12, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (9%)
          Length = 473

 Score = 58.0 bits (29), Expect = 2e-07
 Identities = 50/57 (87%)
 Strand = Plus / Plus

                                                                    
Query: 607 gagcaatatgaggttgctataagcttgatgatgcttagtagggatgtgaatccttgg 663
           |||||| | ||||||||||| |||||||||||||||||||  ||| ||| |||||||
Sbjct: 54  gagcaagaagaggttgctatgagcttgatgatgcttagtaaagatttgagtccttgg 110