Miyakogusa Predicted Gene
- Lj0g3v0304929.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0304929.1 Non Chatacterized Hit- tr|E3L555|E3L555_PUCGT
Putative uncharacterized protein OS=Puccinia graminis
,46.94,2e-17,Got1,Vesicle transport protein, Got1/SFT2-like;
UNCHARACTERIZED,Vesicle transport protein, SFT2-like,CUFF.20515.1
(342 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV765227 similar to UniRef100_A7QEQ0 Cluster: Chromosom... 418 e-117
gnl|LJGI|BP050071 similar to UniRef100_A7QEQ0 Cluster: Chromosom... 396 e-110
gnl|LJGI|TC79326 72 2e-12
>gnl|LJGI|AV765227 similar to UniRef100_A7QEQ0 Cluster: Chromosome chr16 scaffold_86,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_86, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (42%)
Length = 415
Score = 418 bits (211), Expect = e-117
Identities = 211/211 (100%)
Strand = Plus / Minus
Query: 129 agacccagttcgtgttttcgcaacagccatattcctcggatgtgtggttgtggcacttat 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 agacccagttcgtgttttcgcaacagccatattcctcggatgtgtggttgtggcacttat 356
Query: 189 ttgtgctctctggatccatagtaagctgttaacgataatcgcaatcataattgagattgg 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 ttgtgctctctggatccatagtaagctgttaacgataatcgcaatcataattgagattgg 296
Query: 249 tgcccttatttggtacagtctgagttatataccttttgctcgaagaatggtttctgagtt 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 tgcccttatttggtacagtctgagttatataccttttgctcgaagaatggtttctgagtt 236
Query: 309 gatgatccgattgtgtgatacagaactttaa 339
|||||||||||||||||||||||||||||||
Sbjct: 235 gatgatccgattgtgtgatacagaactttaa 205
>gnl|LJGI|BP050071 similar to UniRef100_A7QEQ0 Cluster: Chromosome chr16 scaffold_86,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_86, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (41%)
Length = 507
Score = 396 bits (200), Expect = e-110
Identities = 200/200 (100%)
Strand = Plus / Minus
Query: 2 tgttactgtcattgattgtttttgcgaaacccataaaatttgcattattgttcacctttg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 tgttactgtcattgattgtttttgcgaaacccataaaatttgcattattgttcacctttg 448
Query: 62 gccacctgttagcagttggaagtacagcctttcttcttgggcctgcacaacaattgcaaa 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gccacctgttagcagttggaagtacagcctttcttcttgggcctgcacaacaattgcaaa 388
Query: 122 tgatgttagacccagttcgtgttttcgcaacagccatattcctcggatgtgtggttgtgg 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tgatgttagacccagttcgtgttttcgcaacagccatattcctcggatgtgtggttgtgg 328
Query: 182 cacttatttgtgctctctgg 201
||||||||||||||||||||
Sbjct: 327 cacttatttgtgctctctgg 308
Score = 63.9 bits (32), Expect = 6e-10
Identities = 39/40 (97%), Gaps = 1/40 (2%)
Strand = Plus / Minus
Query: 201 gatccatagtaagctgttaacgataatcgcaatcataatt 240
|||||||||||||||||||||||||||||| |||||||||
Sbjct: 39 gatccatagtaagctgttaacgataatcgc-atcataatt 1
>gnl|LJGI|TC79326
Length = 793
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 299 tttctgagttgatgatccgattgtgtgatacagaactttaaacc 342
|||| ||||||||||||||||||||||||||| |||||||||||
Sbjct: 5 tttcggagttgatgatccgattgtgtgatacataactttaaacc 48