Miyakogusa Predicted Gene

Lj0g3v0304849.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0304849.1 Non Chatacterized Hit- tr|J2XCR2|J2XCR2_9PSED
Putative GTPase, G3E family OS=Pseudomonas sp. GM79
PE,35.82,5.9,seg,NULL,CUFF.20508.1
         (456 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC63425 similar to UniRef100_A7QHY8 Cluster: Chromosome...   462   e-130
gnl|LJGI|TC73173 similar to UniRef100_A7QHY8 Cluster: Chromosome...   414   e-115

>gnl|LJGI|TC63425 similar to UniRef100_A7QHY8 Cluster: Chromosome chr17 scaffold_101,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr17 scaffold_101, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (43%)
          Length = 711

 Score =  462 bits (233), Expect = e-130
 Identities = 233/233 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgagatcactagactcgacccctcattcgttttggcttcttaacataactcagccgaat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 atgagatcactagactcgacccctcattcgttttggcttcttaacataactcagccgaat 584

                                                                       
Query: 61  ctttttcaggcgtcttctctttctagccattttctcaggcaaggtttccctcttcttcac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 ctttttcaggcgtcttctctttctagccattttctcaggcaaggtttccctcttcttcac 524

                                                                       
Query: 121 agccttgaccttcttcttcttcttgtatcttgggtcaacagcgtactccttgggcgtcac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 agccttgaccttcttcttcttcttgtatcttgggtcaacagcgtactccttgggcgtcac 464

                                                                
Query: 181 agccaatcctctactctgggcttcatggaaaagagcattagccttatcaacgc 233
           |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 agccaatcctctactctgggcttcatggaaaagagcattagccttatcaacgc 411



 Score =  406 bits (205), Expect = e-113
 Identities = 214/217 (98%)
 Strand = Plus / Minus

                                                                       
Query: 234 aagtcttaatcccaggttcacacccatcaactttcatcatggcaaagaccttcaaagcat 293
           ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct: 374 aagtcttaatcccaggttcacacccatcagctttcatcatggctaagaccttcaaagcat 315

                                                                       
Query: 294 gctcaaccctctcaatcccacacaaaattgtgagaaactgatagtaagccttcttatcaa 353
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 gctcaaccctctcaatcccacacaaaattgtgagaaactgatagtaagccttcttatcaa 255

                                                                       
Query: 354 gagaagcaccaaacccagcagatttcatcctatcaatcatttcatcctcttcttccaacc 413
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 254 gagaagcaccaaacccagcagatttcatcctatcaatcatttcatccccttcttccaacc 195

                                                
Query: 414 ttgcagcctgatacaagctcctgatcaaaacaacaaa 450
           |||||||||||||||||||||||||||||||||||||
Sbjct: 194 ttgcagcctgatacaagctcctgatcaaaacaacaaa 158


>gnl|LJGI|TC73173 similar to UniRef100_A7QHY8 Cluster: Chromosome chr17 scaffold_101,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr17 scaffold_101, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (44%)
          Length = 680

 Score =  414 bits (209), Expect = e-115
 Identities = 215/217 (99%)
 Strand = Plus / Minus

                                                                       
Query: 234 aagtcttaatcccaggttcacacccatcaactttcatcatggcaaagaccttcaaagcat 293
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 558 aagtcttaatcccaggttcacacccatcagctttcatcatggcaaagaccttcaaagcat 499

                                                                       
Query: 294 gctcaaccctctcaatcccacacaaaattgtgagaaactgatagtaagccttcttatcaa 353
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 gctcaaccctctcaatcccacacaaaattgtgagaaactgatagtaagccttcttatcaa 439

                                                                       
Query: 354 gagaagcaccaaacccagcagatttcatcctatcaatcatttcatcctcttcttccaacc 413
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 438 gagaagcaccaaacccagcagatttcatcctatcaatcatttcatccccttcttccaacc 379

                                                
Query: 414 ttgcagcctgatacaagctcctgatcaaaacaacaaa 450
           |||||||||||||||||||||||||||||||||||||
Sbjct: 378 ttgcagcctgatacaagctcctgatcaaaacaacaaa 342



 Score =  145 bits (73), Expect = 3e-34
 Identities = 79/81 (97%)
 Strand = Plus / Minus

                                                                       
Query: 153 ggtcaacagcgtactccttgggcgtcacagccaatcctctactctgggcttcatggaaaa 212
           |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 675 ggtcaacagcatactccttgggagtcacagccaatcctctactctgggcttcatggaaaa 616

                                
Query: 213 gagcattagccttatcaacgc 233
           |||||||||||||||||||||
Sbjct: 615 gagcattagccttatcaacgc 595