Miyakogusa Predicted Gene

Lj0g3v0304759.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0304759.1 Non Chatacterized Hit- tr|B4FAR5|B4FAR5_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,52.38,0.000000002,ABC_tran,ABC transporter-like; no
description,NULL; ABC_TRANSPORTER_1,ABC transporter, conserved
sit,CUFF.20536.1
         (589 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC78273 homologue to UniRef100_A7PC63 Cluster: Chromoso...   690   0.0  
gnl|LJGI|TC77935 similar to UniRef100_A7Q0Z8 Cluster: Chromosome...    52   4e-06

>gnl|LJGI|TC78273 homologue to UniRef100_A7PC63 Cluster: Chromosome chr2 scaffold_11,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr2 scaffold_11, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (17%)
          Length = 533

 Score =  690 bits (348), Expect = 0.0
 Identities = 348/348 (100%)
 Strand = Plus / Plus

                                                                       
Query: 242 ctaaagtaggggaacgaggggtgcaactatctggtggccagaaacaaagggtagccattg 301
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2   ctaaagtaggggaacgaggggtgcaactatctggtggccagaaacaaagggtagccattg 61

                                                                       
Query: 302 ccagagctgttttgaagaaccctgagatcttgcttctcgatgaagccactagcgcgctag 361
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62  ccagagctgttttgaagaaccctgagatcttgcttctcgatgaagccactagcgcgctag 121

                                                                       
Query: 362 atgtggagtcggagcgcgtggtgcagcaagctctcgacaggttgatgcagaacagaacaa 421
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 atgtggagtcggagcgcgtggtgcagcaagctctcgacaggttgatgcagaacagaacaa 181

                                                                       
Query: 422 cagttatggtggcgcataggctatccacaataaggaatgcagaccaaatctcagttttgc 481
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 cagttatggtggcgcataggctatccacaataaggaatgcagaccaaatctcagttttgc 241

                                                                       
Query: 482 aggatgggaagataattgaacaagggagtcattcaagtcttgtagagaataaaagtggag 541
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 aggatgggaagataattgaacaagggagtcattcaagtcttgtagagaataaaagtggag 301

                                                           
Query: 542 catactttaaactagttagccttcaacaacaacagcctcaaccataga 589
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 catactttaaactagttagccttcaacaacaacagcctcaaccataga 349


>gnl|LJGI|TC77935 similar to UniRef100_A7Q0Z8 Cluster: Chromosome chr7 scaffold_42,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr7 scaffold_42, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (9%)
          Length = 712

 Score = 52.0 bits (26), Expect = 4e-06
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                     
Query: 267 actatctggtggccagaaacaaagggtagccattgccagagc 308
           |||||||||||| ||||||||| ||||||| |||||| ||||
Sbjct: 106 actatctggtgggcagaaacaacgggtagctattgcccgagc 147