Miyakogusa Predicted Gene
- Lj0g3v0304639.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0304639.1 Non Chatacterized Hit- tr|I1M386|I1M386_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.30236
PE,60.63,0,UBC-like,Ubiquitin-conjugating enzyme/RWD-like;
UBIQUITIN_CONJUGAT_2,Ubiquitin-conjugating enzyme, E,CUFF.20493.1
(1290 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60564 similar to UniRef100_Q3T2N3 Cluster: Truncated ... 492 e-138
gnl|LJGI|FS350619 similar to UniRef100_A7P1M3 Cluster: Chromosom... 272 5e-72
gnl|LJGI|BP042910 weakly similar to UniRef100_A7P1M3 Cluster: Ch... 159 5e-38
gnl|LJGI|FS361670 86 6e-16
>gnl|LJGI|TC60564 similar to UniRef100_Q3T2N3 Cluster: Truncated methicillin
resistance protein MecR1; n=2; Staphylococcus|Rep:
Truncated methicillin resistance protein MecR1 -
Staphylococcus aureus, partial (44%)
Length = 820
Score = 492 bits (248), Expect = e-138
Identities = 248/248 (100%)
Strand = Plus / Plus
Query: 1 atggactcctctcagccttctaggtcattagagcctactaactctaaaacggacaatgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 atggactcctctcagccttctaggtcattagagcctactaactctaaaacggacaatgtt 632
Query: 61 ggtcactcttctggaacagagtttgctcctcaattattttctcaagctgccccgagtaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 ggtcactcttctggaacagagtttgctcctcaattattttctcaagctgccccgagtaag 692
Query: 121 aagaaatcagctacatcacagcaaagtggagatgacttgaatctttcattaggaaaagag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 aagaaatcagctacatcacagcaaagtggagatgacttgaatctttcattaggaaaagag 752
Query: 181 tcatctaagtctaagtggtcttttaaatctttccacagtaaaatgatgtctttcatttct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 tcatctaagtctaagtggtcttttaaatctttccacagtaaaatgatgtctttcatttct 812
Query: 241 tgtgcttc 248
||||||||
Sbjct: 813 tgtgcttc 820
>gnl|LJGI|FS350619 similar to UniRef100_A7P1M3 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (34%)
Length = 706
Score = 272 bits (137), Expect = 5e-72
Identities = 293/345 (84%)
Strand = Plus / Minus
Query: 811 ggcagcaagaaagagaagtggcttccaggtgtttctacaatgctacaagttctagtctct 870
||||| ||||| |||||||||||||| |||||||| ||||| |||||||||||||||||
Sbjct: 706 ggcagtaagaatgagaagtggcttccgggtgtttcaacaattttacaagttctagtctct 647
Query: 871 atacaaggtcttatcttgaatacaaagccatactttaatgagcctggatatgaaagttcg 930
||||||||||| ||||||||||||||||| |||||||||||||||||||||| | | |
Sbjct: 646 atacaaggtctaatcttgaatacaaagccttactttaatgagcctggatatgcacatatg 587
Query: 931 aaaggtacaccagatggtgaaaagaagtccctgaagtacaatgagcaaacattcattcta 990
| || | | ||||||||| || ||||| ||| |||||| | |||||||| ||
Sbjct: 586 agtggctcggctgatggtgaattgagatccctacggtataatgaggatacattcatgctg 527
Query: 991 tcattgaagacaatgatgtataagataaaacagcctccaaagaattttgaggactttgtt 1050
|| ||||||||||||||||||| ||||| | |||||||||||||||||||||||| |||
Sbjct: 526 tctttgaagacaatgatgtatatgataagaaggcctccaaagaattttgaggacttcgtt 467
Query: 1051 ttggggcatttccgcagccgaggccatgatattctgatggcatgtaaagcatacatggaa 1110
| ||||| ||| ||||||||| ||||||||| || ||||||||||||||||||||||
Sbjct: 466 gttgggcacttctgcagccgagctcatgatattttggtggcatgtaaagcatacatggat 407
Query: 1111 ggtgttcaaattggaggtgtagtcaaaggtggggttcaggatgtt 1155
|||| |||| |||| || ||||||||||||||||||||||||||
Sbjct: 406 ggtgctcaagttggctgtttagtcaaaggtggggttcaggatgtt 362
>gnl|LJGI|BP042910 weakly similar to UniRef100_A7P1M3 Cluster: Chromosome chr19
scaffold_4, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr19 scaffold_4, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (17%)
Length = 401
Score = 159 bits (80), Expect = 5e-38
Identities = 158/184 (85%)
Strand = Plus / Minus
Query: 1088 tggcatgtaaagcatacatggaaggtgttcaaattggaggtgtagtcaaaggtggggttc 1147
|||| |||||| |||||||||||||||||||| ||||| |||| |||||||||||| |||
Sbjct: 401 tggcgtgtaaaacatacatggaaggtgttcaagttggatgtgtggtcaaaggtgggtttc 342
Query: 1148 aggatgttcatgaggttaagggaagctgctcaaagaaatttaagaagtctttacctggac 1207
|||||||| |||||| ||| |||||||||||| || |||||||| ||||||| |||||
Sbjct: 341 aggatgttgatgagggtaacggaagctgctcacagggatttaagatgtctttagctggat 282
Query: 1208 atgtgaataacctcgtcaaagatcttgcaaaaattggagctaaggactgtgagaatttca 1267
||||| | || || ||| | ||| |||||||| ||||||||||||||||||||| |||
Sbjct: 281 atgtgcagaagcttgtccaggattttgcaaaatgtggagctaaggactgtgagaaattcc 222
Query: 1268 tatt 1271
||||
Sbjct: 221 tatt 218
>gnl|LJGI|FS361670
Length = 279
Score = 85.7 bits (43), Expect = 6e-16
Identities = 43/43 (100%)
Strand = Plus / Minus
Query: 1248 taaggactgtgagaatttcatattgatcaaggctaaaaagtaa 1290
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 taaggactgtgagaatttcatattgatcaaggctaaaaagtaa 233