Miyakogusa Predicted Gene
- Lj0g3v0304429.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0304429.1 Non Chatacterized Hit- tr|I3SB43|I3SB43_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,97.77,0,coiled-coil,NULL; Snf7,Snf7; seg,NULL; CHARGED
MULTIVESICULAR BODY PROTEIN 2A (CHROMATIN-MODIFYING P,CUFF.20481.1
(675 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57638 homologue to UniRef100_A7PE04 Cluster: Chromoso... 1322 0.0
gnl|LJGI|TC59441 similar to UniRef100_A7PE04 Cluster: Chromosome... 200 8e-51
>gnl|LJGI|TC57638 homologue to UniRef100_A7PE04 Cluster: Chromosome chr11
scaffold_13, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (96%)
Length = 947
Score = 1322 bits (667), Expect = 0.0
Identities = 673/675 (99%)
Strand = Plus / Plus
Query: 1 atgagttttctgttcggcagtagaaaaactccagcagagcttttgagggagaataaaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 atgagttttctgttcggcagtagaaaaactccagcagagcttttgagggagaataaaagg 172
Query: 61 atgctagataagtccattagagaaattaaaagagaaagacaaggcttgcagaatcaagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 atgctagataagtccattagagaaattaaaagagaaagacaaggcttgcagaatcaagaa 232
Query: 121 aagaagttgattgtagagatcaagaagaatgctaaacaaggacagatgggggcggtgaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 aagaagttgattgtagagatcaagaagaatgctaaacaaggacagatgggggcggtgaga 292
Query: 181 gtgatggccaaggatcttatccgaactcgccatcagattgaaaagttttacaagcttaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 gtgatggccaaggatcttatccgaactcgccatcagattgaaaagttttacaagcttaaa 352
Query: 241 tcccaactccagggtgtttctttgagaattcagactctaaaatctacccaagcgatggga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 tcccaactccagggtgtttctttgagaattcagactctaaaatctacccaagcgatggga 412
Query: 301 gaggctatgaaaggagtaactaaggcaatgggtcaaatgaataggaggttgaatttgcct 360
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 413 gaggctatgaaaggagtaactaaggcaatgggtcaaatgaataggaggatgaatttgcct 472
Query: 361 tccttaccgaagataatgcaagagtttgaacggcagaatgagaagatggaactggtgtct 420
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 tccttacagaagataatgcaagagtttgaacggcagaatgagaagatggaactggtgtct 532
Query: 421 gaggtgatgggagatgcaattgatgatgctctggaaggtgatgaagaggaggaagagaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 gaggtgatgggagatgcaattgatgatgctctggaaggtgatgaagaggaggaagagaca 592
Query: 481 gacgagcttgtcaatcaggttcttgatgagattggaattgatatcaactctgagcttttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 gacgagcttgtcaatcaggttcttgatgagattggaattgatatcaactctgagcttttg 652
Query: 541 catacccctgcatcaacctcggttgctgcaccagccgcaaagagcaaggttgctcaagct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 catacccctgcatcaacctcggttgctgcaccagccgcaaagagcaaggttgctcaagct 712
Query: 601 gaaccaacaggcaatgacgacagtggaatagatgatgatctacaagctaggttagataac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 gaaccaacaggcaatgacgacagtggaatagatgatgatctacaagctaggttagataac 772
Query: 661 ctgagaaaaatgtaa 675
|||||||||||||||
Sbjct: 773 ctgagaaaaatgtaa 787
>gnl|LJGI|TC59441 similar to UniRef100_A7PE04 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (97%)
Length = 910
Score = 200 bits (101), Expect = 8e-51
Identities = 329/405 (81%)
Strand = Plus / Plus
Query: 115 caagaaaagaagttgattgtagagatcaagaagaatgctaaacaaggacagatgggggcg 174
||||| ||||| |||||| | ||||| ||||| | ||| |||||||| || ||||| ||
Sbjct: 225 caagagaagaaattgattttggagataaagaaaagtgccaaacaaggccaaatgggagct 284
Query: 175 gtgagagtgatggccaaggatcttatccgaactcgccatcagattgaaaagttttacaag 234
|| ||||| ||||| || |||||| | |||| | |||||| ||||||||||||| |||
Sbjct: 285 gttagagttatggcaaaagatcttgttagaacaaggcatcaggttgaaaagttttataag 344
Query: 235 cttaaatcccaactccagggtgtttctttgagaattcagactctaaaatctacccaagcg 294
|| ||||| || ||||| ||||| ||| | ||||||||||| | || || || |||||
Sbjct: 345 ctaaaatcgcagctccaaggtgtatctctcagaattcagacattgaagtcaacacaagca 404
Query: 295 atgggagaggctatgaaaggagtaactaaggcaatgggtcaaatgaataggaggttgaat 354
||||| ||||| |||||||| || || ||||| ||||| |||||||||||| ||||
Sbjct: 405 atgggtgaggcgatgaaaggggtgacgaaggcgatggggcaaatgaataggcaaatgaac 464
Query: 355 ttgccttccttaccgaagataatgcaagagtttgaacggcagaatgagaagatggaactg 414
||||| || || | ||| || |||||||| ||||| | |||||||||||||||||| ||
Sbjct: 465 ttgccatctttgcagaaaatcatgcaagaatttgagagacagaatgagaagatggaattg 524
Query: 415 gtgtctgaggtgatgggagatgcaattgatgatgctctggaaggtgatgaagaggaggaa 474
| |||||||||||||||||||||| ||||||||| ||||||| ||||| || || ||
Sbjct: 525 acgactgaggtgatgggagatgcaatagatgatgctttggaaggggatgaggaagaagag 584
Query: 475 gagacagacgagcttgtcaatcaggttcttgatgagattggaatt 519
|| |||||||| || || || ||||||||||||||||||||||||
Sbjct: 585 gaaacagacgatctagtgaaccaggttcttgatgagattggaatt 629