Miyakogusa Predicted Gene

Lj0g3v0304349.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0304349.1 Non Chatacterized Hit- tr|E9C3V2|E9C3V2_CAPO3
Putative uncharacterized protein OS=Capsaspora
owczarz,43.04,0.0000001,SUBFAMILY NOT NAMED,NULL; VPRBP
PROTEIN-RELATED,NULL; seg,NULL,CUFF.20477.1
         (852 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS361548 similar to UniRef100_A7P540 Cluster: Chromosom...   190   1e-47

>gnl|LJGI|FS361548 similar to UniRef100_A7P540 Cluster: Chromosome chr4 scaffold_6,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_6, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (9%)
          Length = 556

 Score =  190 bits (96), Expect = 1e-47
 Identities = 183/212 (86%)
 Strand = Plus / Minus

                                                                       
Query: 641 attcatctcttgcttctctggactgccttcgcgctctagcgtgtcgagtcttgcttggct 700
           ||||| ||| |||| || ||||||| ||||| |||||||| ||||||||| ||||||| |
Sbjct: 538 attcacctcctgctgctttggactgtcttcgtgctctagcatgtcgagtcctgcttggtt 479

                                                                       
Query: 701 tagccagagatgatactattgcccacatattgactaagcttcaggttgggaaaaagctgt 760
           |||| |||||||||| ||| || ||||||||||| ||||| ||||||||||| |||||||
Sbjct: 478 tagcaagagatgatattatagcacacatattgacaaagctacaggttgggaagaagctgt 419

                                                                       
Query: 761 cagaactgattcaagattcaggtagctcgacacttggaaccgagcagggtaggtggcaag 820
           ||||||| |||   |||||||| ||   ||||| |||||| |||||||||||||||||||
Sbjct: 418 cagaactaattagggattcaggcagtcagacacatggaacagagcagggtaggtggcaag 359

                                           
Query: 821 ctgaactttcccaggctgcaattgagctaatt 852
           ||||||||||||| |||||||| ||| |||||
Sbjct: 358 ctgaactttcccaagctgcaatcgagttaatt 327