Miyakogusa Predicted Gene

Lj0g3v0304169.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0304169.1 tr|A8IMC1|A8IMC1_CHLRE Predicted protein
(Fragment) OS=Chlamydomonas reinhardtii
GN=CHLREDRAFT_14484,55.68,1e-18,Abi,CAAX amino terminal protease;
YHET-RELATED,NULL; ABHYDROLASE DOMAIN-CONTAINING
PROTEIN,NULL,CUFF.20460.1
         (387 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC68940 similar to UniRef100_A7QEE4 Cluster: Chromosome...   210   5e-54

>gnl|LJGI|TC68940 similar to UniRef100_A7QEE4 Cluster: Chromosome chr1 scaffold_84,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr1 scaffold_84, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (64%)
          Length = 988

 Score =  210 bits (106), Expect = 5e-54
 Identities = 202/230 (87%), Gaps = 3/230 (1%)
 Strand = Plus / Plus

                                                                       
Query: 122 ttcttgctccacttcttgaggagactgtatttcgaggctttgttatggcttccttgacta 181
           ||||||||||||| ||||||||||||||||||||||||||| ||||| ||||| ||||||
Sbjct: 465 ttcttgctccactccttgaggagactgtatttcgaggcttt-ttatgacttccctgacta 523

                                                                       
Query: 182 agtgggttcctacaccagttgctgtcctcattagtgctgcggtgttttctctctgc-cac 240
           | ||||||||||||||||||||| || |||||||| |||| |||||| | || ||| || 
Sbjct: 524 aatgggttcctacaccagttgctatcatcattagttctgctgtgtttgccct-tgctcat 582

                                                                       
Query: 241 ttcactcctggagtatttccatggctgtttgttttagggacttttttggggatttcatat 300
            |||||||||||| |||||||  | |||||||| ||||||||  ||||||| ||||||||
Sbjct: 583 ctcactcctggagaatttccacagttgtttgttctagggactgctttgggggtttcatat 642

                                                             
Query: 301 gctcaaactcgcaacctcctcactccaatcactattcatgctttctggaa 350
           |||||||||| ||| || |||||||| |||||||| ||||||||||||||
Sbjct: 643 gctcaaactcacaatcttctcactcctatcactatccatgctttctggaa 692