Miyakogusa Predicted Gene

Lj0g3v0304089.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0304089.1 Non Chatacterized Hit- tr|I1JNR8|I1JNR8_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,72.81,0,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.20452.1
         (2337 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC70247 similar to UniRef100_A7NWE7 Cluster: Chromosome...   182   7e-45
gnl|LJGI|BW611072 similar to UniRef100_A7PU69 Cluster: Chromosom...   157   4e-37
gnl|LJGI|DC593099 similar to UniRef100_A7NWE7 Cluster: Chromosom...    66   1e-09
gnl|LJGI|TC68604 similar to UniRef100_A7NWE7 Cluster: Chromosome...    62   2e-08

>gnl|LJGI|TC70247 similar to UniRef100_A7NWE7 Cluster: Chromosome chr5 scaffold_2,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr5 scaffold_2, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (5%)
          Length = 536

 Score =  182 bits (92), Expect = 7e-45
 Identities = 140/156 (89%)
 Strand = Plus / Minus

                                                                        
Query: 1077 aagctacttttcagctgaagttacacggggcatatggaagccggcttttatgaatggaag 1136
            ||||||||||||||||||||| |||| ||||||||| ||||| |||| ||||||||||| 
Sbjct: 171  aagctacttttcagctgaagtaacacagggcatatgaaagccagcttatatgaatggaac 112

                                                                        
Query: 1137 tgattggcctagccccgccgcaaatttatctctagttgagcaacagattaaaaacattct 1196
            |||||||||||| || ||||||||||||||  | |||||||||||||| || || |||||
Sbjct: 111  tgattggcctagtcctgccgcaaatttatccatggttgagcaacagataaagaaaattct 52

                                                
Query: 1197 agcagccacaggtgttgatgtcccaagccttgctgt 1232
            ||||||||| ||||||||||||||||||||| ||||
Sbjct: 51   agcagccactggtgttgatgtcccaagccttcctgt 16


>gnl|LJGI|BW611072 similar to UniRef100_A7PU69 Cluster: Chromosome chr7 scaffold_31,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr7 scaffold_31, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (10%)
          Length = 489

 Score =  157 bits (79), Expect = 4e-37
 Identities = 158/183 (86%), Gaps = 1/183 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1368 ttgcgcctggccctgcatgcccattgtggcttctttgtggatccagaaggcgaagcgttg 1427
            |||| ||||||| |||||||||||||| |||||||||||| ||||||||| |||||||||
Sbjct: 489  ttgcccctggccatgcatgcccattgtagcttctttgtgggtccagaaggtgaagcgttg 430

                                                                        
Query: 1428 gaacgactactttctgttctctgcttccagcactatcttccaccacaacagggatgctgt 1487
            ||  | || | || | |||||||||||  | ||| |||||||||||| ||||||||| ||
Sbjct: 429  gagtggcttccttgtattctctgcttctggaactgtcttccaccacagcagggatgccgt 370

                                                                        
Query: 1488 agttcaacttctaaaatgttgcttcacatcca-cccttggacttgactctgcctctgttt 1546
            |||||| ||||||||| ||||||||||||| | ||||||||||||  ||||||||| |||
Sbjct: 369  agttcagcttctaaaaagttgcttcacatcaatcccttggacttggttctgcctctattt 310

               
Query: 1547 ata 1549
            |||
Sbjct: 309  ata 307


>gnl|LJGI|DC593099 similar to UniRef100_A7NWE7 Cluster: Chromosome chr5 scaffold_2,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_2, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (14%)
          Length = 581

 Score = 65.9 bits (33), Expect = 1e-09
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                       
Query: 127 tcagatgaagaaaagatatctgctgctaccattctgtgtggggcatctctaatacgtgga 186
           ||||| || |||||||||||||||||| | ||||| ||||| |||||  |||| || |||
Sbjct: 246 tcagaagatgaaaagatatctgctgctgctattctttgtggagcatccttaattcgggga 305

                            
Query: 187 tggaatatccaggagca 203
           |||||||| ||||||||
Sbjct: 306 tggaatatacaggagca 322


>gnl|LJGI|TC68604 similar to UniRef100_A7NWE7 Cluster: Chromosome chr5 scaffold_2,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr5 scaffold_2, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (15%)
          Length = 791

 Score = 61.9 bits (31), Expect = 2e-08
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                       
Query: 2126 ctacttggcgaacctacgtgtcaggttttgtgagcttgatggt 2168
            ||||||||||  |||| ||||||||||||||||||||||||||
Sbjct: 393  ctacttggcgtgcctatgtgtcaggttttgtgagcttgatggt 435