Miyakogusa Predicted Gene
- Lj0g3v0303829.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0303829.1 Non Chatacterized Hit- tr|I3S103|I3S103_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.13,0,Ribosomal_L10,Ribosomal protein L10/acidic P0; MRNA
TURNOVER PROTEIN 4 MRT4,NULL; 60S ACIDIC RIBOSOM,CUFF.20434.1
(693 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58275 similar to UniRef100_A2Q489 Cluster: Ribosomal ... 1374 0.0
gnl|LJGI|GO034468 similar to UniRef100_A7PYW1 Cluster: Chromosom... 240 1e-62
>gnl|LJGI|TC58275 similar to UniRef100_A2Q489 Cluster: Ribosomal protein L10; n=1;
Medicago truncatula|Rep: Ribosomal protein L10 -
Medicago truncatula (Barrel medic), complete
Length = 1033
Score = 1374 bits (693), Expect = 0.0
Identities = 693/693 (100%)
Strand = Plus / Plus
Query: 1 atgccaaaatcgaaacggaataaacaagttacactatcgaagacgaagaagaagggaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 atgccaaaatcgaaacggaataaacaagttacactatcgaagacgaagaagaagggaaga 133
Query: 61 gaacacaaagaggtaatagtgaacgcgattagagatgcagctgaaaagtacagttcgttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 gaacacaaagaggtaatagtgaacgcgattagagatgcagctgaaaagtacagttcgttg 193
Query: 121 tacgtgttctccttcgagaacatgaggaatctcaaattcaaggagttcagggaccaattg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 tacgtgttctccttcgagaacatgaggaatctcaaattcaaggagttcagggaccaattg 253
Query: 181 aaatcgagtagcagattcttccttggttccaacaaagtcatgcaggtcgctcttggtcgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 aaatcgagtagcagattcttccttggttccaacaaagtcatgcaggtcgctcttggtcgt 313
Query: 241 tctgcttctgatgagatcaaacctcgcctgtataaggtttcaaagttgcttcgcggagat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 tctgcttctgatgagatcaaacctcgcctgtataaggtttcaaagttgcttcgcggagat 373
Query: 301 tctggcatgttttttaccaatttgtctaaagaagaagttgaaaggctgttcaatggatat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 tctggcatgttttttaccaatttgtctaaagaagaagttgaaaggctgttcaatggatat 433
Query: 361 gaggaatatgactttgcaagaacaggaggcattgccaccgaaaaggtggatctccaagag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 gaggaatatgactttgcaagaacaggaggcattgccaccgaaaaggtggatctccaagag 493
Query: 421 ggtcctttagagcagtttacacatgagatggaaccttttctcaggaagcaagggatgcct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 ggtcctttagagcagtttacacatgagatggaaccttttctcaggaagcaagggatgcct 553
Query: 481 gttcggttaaataaaggtgttgtggagcttgtttctgattttgttgtttgtgaagaggga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 gttcggttaaataaaggtgttgtggagcttgtttctgattttgttgtttgtgaagaggga 613
Query: 541 aagcccttgtcacctgaggcatctcgcatactgcgtttgctgggaatcaagatggctaca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 aagcccttgtcacctgaggcatctcgcatactgcgtttgctgggaatcaagatggctaca 673
Query: 601 tttcgacttcacctggtttgcaggtggactcccgatgattttgaactttacattgatgga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 tttcgacttcacctggtttgcaggtggactcccgatgattttgaactttacattgatgga 733
Query: 661 cctggtgattcagatgttgaatgctcatagtaa 693
|||||||||||||||||||||||||||||||||
Sbjct: 734 cctggtgattcagatgttgaatgctcatagtaa 766
>gnl|LJGI|GO034468 similar to UniRef100_A7PYW1 Cluster: Chromosome chr12 scaffold_38,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_38, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (28%)
Length = 687
Score = 240 bits (121), Expect = 1e-62
Identities = 121/121 (100%)
Strand = Plus / Plus
Query: 573 gcgtttgctgggaatcaagatggctacatttcgacttcacctggtttgcaggtggactcc 632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 gcgtttgctgggaatcaagatggctacatttcgacttcacctggtttgcaggtggactcc 617
Query: 633 cgatgattttgaactttacattgatggacctggtgattcagatgttgaatgctcatagta 692
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 cgatgattttgaactttacattgatggacctggtgattcagatgttgaatgctcatagta 677
Query: 693 a 693
|
Sbjct: 678 a 678
Score = 149 bits (75), Expect = 3e-35
Identities = 78/79 (98%)
Strand = Plus / Plus
Query: 495 aggtgttgtggagcttgtttctgattttgttgtttgtgaagagggaaagcccttgtcacc 554
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 10 aggtgttgtggagcttgtttctgattttgttgtttgtgaagagggaaagtccttgtcacc 69
Query: 555 tgaggcatctcgcatactg 573
|||||||||||||||||||
Sbjct: 70 tgaggcatctcgcatactg 88