Miyakogusa Predicted Gene
- Lj0g3v0303629.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0303629.1 gi|1370165|emb|Z73932.1|.path1.1
(612 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61894 UniRef100_Q40203 Cluster: RAB1C; n=1; Lotus jap... 1213 0.0
gnl|LJGI|TC58412 UniRef100_Q40203 Cluster: RAB1C; n=1; Lotus jap... 1213 0.0
gnl|LJGI|TC70276 UniRef100_Q40204 Cluster: RAB1D; n=1; Lotus jap... 323 7e-88
gnl|LJGI|TC57675 homologue to UniRef100_Q40204 Cluster: RAB1D; n... 307 4e-83
gnl|LJGI|AU089325 UniRef100_Q40204 Cluster: RAB1D; n=1; Lotus ja... 291 3e-78
gnl|LJGI|TC81089 homologue to UniRef100_Q40203 Cluster: RAB1C; n... 264 6e-70
gnl|LJGI|AV773071 homologue to UniRef100_Q40203 Cluster: RAB1C; ... 176 1e-43
gnl|LJGI|DC594000 UniRef100_Q40205 Cluster: RAB1E; n=1; Lotus ja... 107 8e-23
gnl|LJGI|TC67279 UniRef100_Q40201 Cluster: RAB1A; n=1; Lotus jap... 86 3e-16
gnl|LJGI|TC57519 UniRef100_Q40201 Cluster: RAB1A; n=1; Lotus jap... 86 3e-16
>gnl|LJGI|TC61894 UniRef100_Q40203 Cluster: RAB1C; n=1; Lotus japonicus|Rep: RAB1C -
Lotus japonicus, complete
Length = 807
Score = 1213 bits (612), Expect = 0.0
Identities = 612/612 (100%)
Strand = Plus / Plus
Query: 1 atgaatcctgaatacgactatttgttcaagcttttgctgattggagattctggtgtaggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 atgaatcctgaatacgactatttgttcaagcttttgctgattggagattctggtgtaggc 211
Query: 61 aagtcatgtcttctcctgaggtttgctgatgattcataccttgacagctatatcagtacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 aagtcatgtcttctcctgaggtttgctgatgattcataccttgacagctatatcagtacc 271
Query: 121 attggagtggactttaaaatccgaactgttgagcaggatggaaagactattaaacttcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 attggagtggactttaaaatccgaactgttgagcaggatggaaagactattaaacttcaa 331
Query: 181 atttgggacactgctggtcaagaacgtttccggacaatcacaagcagctactaccgtggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 atttgggacactgctggtcaagaacgtttccggacaatcacaagcagctactaccgtggg 391
Query: 241 gctcatggcataattgttgtttatgatgtcactgaccaagagagcttcaacaatgttaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 gctcatggcataattgttgtttatgatgtcactgaccaagagagcttcaacaatgttaag 451
Query: 301 caatggctgaatgaaattgaccgttatgcaagtgaaaacgttaacaagcttctagttgga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 caatggctgaatgaaattgaccgttatgcaagtgaaaacgttaacaagcttctagttgga 511
Query: 361 aacaagtgtgatctcacggcaaataaagttgtgtcctatgagacagcaaaggcatttgca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 aacaagtgtgatctcacggcaaataaagttgtgtcctatgagacagcaaaggcatttgca 571
Query: 421 gatgaaattggaattcctttcatggaaactagtgctaagaacgccaccaatgtggagcag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 gatgaaattggaattcctttcatggaaactagtgctaagaacgccaccaatgtggagcag 631
Query: 481 gctttcatggccatggctgctgaaattaaaaacagaatggcaagccaaccagtgaacaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 gctttcatggccatggctgctgaaattaaaaacagaatggcaagccaaccagtgaacaat 691
Query: 541 gcaaggcctccaacagtccaaatccgaggacagccagtgaatcaaaagtctggttgctgc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 gcaaggcctccaacagtccaaatccgaggacagccagtgaatcaaaagtctggttgctgc 751
Query: 601 tcgtcttagaga 612
||||||||||||
Sbjct: 752 tcgtcttagaga 763
>gnl|LJGI|TC58412 UniRef100_Q40203 Cluster: RAB1C; n=1; Lotus japonicus|Rep: RAB1C -
Lotus japonicus, complete
Length = 1083
Score = 1213 bits (612), Expect = 0.0
Identities = 612/612 (100%)
Strand = Plus / Plus
Query: 1 atgaatcctgaatacgactatttgttcaagcttttgctgattggagattctggtgtaggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 atgaatcctgaatacgactatttgttcaagcttttgctgattggagattctggtgtaggc 179
Query: 61 aagtcatgtcttctcctgaggtttgctgatgattcataccttgacagctatatcagtacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 aagtcatgtcttctcctgaggtttgctgatgattcataccttgacagctatatcagtacc 239
Query: 121 attggagtggactttaaaatccgaactgttgagcaggatggaaagactattaaacttcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 attggagtggactttaaaatccgaactgttgagcaggatggaaagactattaaacttcaa 299
Query: 181 atttgggacactgctggtcaagaacgtttccggacaatcacaagcagctactaccgtggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 atttgggacactgctggtcaagaacgtttccggacaatcacaagcagctactaccgtggg 359
Query: 241 gctcatggcataattgttgtttatgatgtcactgaccaagagagcttcaacaatgttaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 gctcatggcataattgttgtttatgatgtcactgaccaagagagcttcaacaatgttaag 419
Query: 301 caatggctgaatgaaattgaccgttatgcaagtgaaaacgttaacaagcttctagttgga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 caatggctgaatgaaattgaccgttatgcaagtgaaaacgttaacaagcttctagttgga 479
Query: 361 aacaagtgtgatctcacggcaaataaagttgtgtcctatgagacagcaaaggcatttgca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 aacaagtgtgatctcacggcaaataaagttgtgtcctatgagacagcaaaggcatttgca 539
Query: 421 gatgaaattggaattcctttcatggaaactagtgctaagaacgccaccaatgtggagcag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 gatgaaattggaattcctttcatggaaactagtgctaagaacgccaccaatgtggagcag 599
Query: 481 gctttcatggccatggctgctgaaattaaaaacagaatggcaagccaaccagtgaacaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 gctttcatggccatggctgctgaaattaaaaacagaatggcaagccaaccagtgaacaat 659
Query: 541 gcaaggcctccaacagtccaaatccgaggacagccagtgaatcaaaagtctggttgctgc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 gcaaggcctccaacagtccaaatccgaggacagccagtgaatcaaaagtctggttgctgc 719
Query: 601 tcgtcttagaga 612
||||||||||||
Sbjct: 720 tcgtcttagaga 731
>gnl|LJGI|TC70276 UniRef100_Q40204 Cluster: RAB1D; n=1; Lotus japonicus|Rep: RAB1D -
Lotus japonicus, complete
Length = 1070
Score = 323 bits (163), Expect = 7e-88
Identities = 477/581 (82%), Gaps = 3/581 (0%)
Strand = Plus / Plus
Query: 1 atgaatcctgaatacgactatttgttcaagcttttgctgattggagattctggtgtaggc 60
|||||||| || || || ||| |||||||||| | || |||||||| |||||||| ||
Sbjct: 220 atgaatcccgagtatgattatctgttcaagctccttcttattggagactctggtgttgga 279
Query: 61 aagtcatgtcttctcctgaggtttgctgatgattcataccttgacagctatatcagtacc 120
|| ||||| ||||| ||||| |||||||||||||| ||| |||| ||||| || || |||
Sbjct: 280 aaatcatgccttcttctgagatttgctgatgattcttacattgaaagctacataagcacc 339
Query: 121 attggagtggactttaaaatccgaactgttgagcaggatggaaagactattaaacttcaa 180
|| ||||| || |||||||| || |||||||||||||||| |||||| |||||||| ||
Sbjct: 340 atcggagttgattttaaaattcgcactgttgagcaggatgcaaagaccattaaactacag 399
Query: 181 atttgggacactgctggtcaagaacgtttccggacaatcacaagcagctactaccgtggg 240
|||||||| |||||||| ||||| ||||| ||||||| || || |||||||| ||||||
Sbjct: 400 atttgggatactgctgggcaagagcgttttaggacaataaccagtagctactatcgtggg 459
Query: 241 gctcatggcataattgttgtttatgatgtcactgaccaagagagcttcaacaatgttaag 300
|||||||| || ||| |||||||||| || || || ||||||||||||| ||||| |||
Sbjct: 460 gctcatggaatcattattgtttatgacgtaacagatgaagagagcttcaataatgtaaag 519
Query: 301 caatggctgaatgaaattgaccgttatgcaagtgaaaacgttaacaagcttctagttgga 360
|||||||| | |||||||||||| ||||| ||||| || |||||||| ||| | |||||
Sbjct: 520 caatggctcagtgaaattgaccgctatgccagtgataatgttaacaaacttttggttggg 579
Query: 361 aacaagtgtgatctcacggcaaataaagttgtgtcctatgagacagcaaaggcatttgca 420
|| ||||||||||| || ||||||| || || || ||||| ||||| || | ||||||
Sbjct: 580 aataagtgtgatctgacagcaaatagagcggtctcatatgatacagctaaagagtttgca 639
Query: 421 gatgaaattggaattcctttcatggaaactagtgctaagaacgccaccaatgtggagcag 480
||| ||||||| || ||||| |||||||||||||| || | || || ||||| || |||
Sbjct: 640 gatcaaattggcataccttttatggaaactagtgcaaaagatgctacaaatgtagaacag 699
Query: 481 gctttcatggccatggctgctgaaattaaaaacagaatggcaagccaacca---gtgaac 537
|| |||||||||||| |||| || || || |||||||| ||||||||| | ||
Sbjct: 700 gcattcatggccatgtctgcctccatcaagaatagaatggcgagccaaccaagcgcaaat 759
Query: 538 aatgcaaggcctccaacagtccaaatccgaggacagccagt 578
|||| ||||||||||||||| |||||| |||||||||||||
Sbjct: 760 aatggaaggcctccaacagtgcaaatcagaggacagccagt 800
>gnl|LJGI|TC57675 homologue to UniRef100_Q40204 Cluster: RAB1D; n=1; Lotus
japonicus|Rep: RAB1D - Lotus japonicus, complete
Length = 1024
Score = 307 bits (155), Expect = 4e-83
Identities = 440/535 (82%)
Strand = Plus / Plus
Query: 23 tgttcaagcttttgctgattggagattctggtgtaggcaagtcatgtcttctcctgaggt 82
|||||||||| | || ||||| || |||||||| ||||| ||||| ||||| ||||| |
Sbjct: 186 tgttcaagctccttcttattggtgactctggtgttggcaaatcatgccttcttctgagat 245
Query: 83 ttgctgatgattcataccttgacagctatatcagtaccattggagtggactttaaaatcc 142
||||||||||||||||| |||| ||||| || || || |||||||| || |||||||| |
Sbjct: 246 ttgctgatgattcatacattgagagctacataagcacaattggagttgattttaaaatac 305
Query: 143 gaactgttgagcaggatggaaagactattaaacttcaaatttgggacactgctggtcaag 202
| || ||||||||||||| ||| || |||||||| || || ||||| || ||||| ||||
Sbjct: 306 gcaccgttgagcaggatgcaaaaaccattaaactccagatctgggatacagctgggcaag 365
Query: 203 aacgtttccggacaatcacaagcagctactaccgtggggctcatggcataattgttgttt 262
|| | || |||||||||| || ||||||||||||||||| || || || ||| ||||||
Sbjct: 366 aaagatttaggacaatcaccagtagctactaccgtggggcacacgggatcattattgttt 425
Query: 263 atgatgtcactgaccaagagagcttcaacaatgttaagcaatggctgaatgaaattgacc 322
||||||| || || |||||||||| |||||||| ||||| ||||| | ||||||||||
Sbjct: 426 atgatgtaacagatgaagagagctttaacaatgtgaagcagtggctcagcgaaattgacc 485
Query: 323 gttatgcaagtgaaaacgttaacaagcttctagttggaaacaagtgtgatctcacggcaa 382
| ||||| ||||| ||||| ||||||||| | ||||| ||||||| ||||| || ||||
Sbjct: 486 gatatgccagtgataacgtcaacaagcttttggttggcaacaagtccgatctgactgcaa 545
Query: 383 ataaagttgtgtcctatgagacagcaaaggcatttgcagatgaaattggaattcctttca 442
||| || ||| || ||||| || || || |||||||| |||||||| || |||||||| |
Sbjct: 546 atagagctgtctcatatgaaaccgctaaagcatttgctgatgaaataggcattcctttta 605
Query: 443 tggaaactagtgctaagaacgccaccaatgtggagcaggctttcatggccatggctgctg 502
||||||| ||||| || | || || ||||| || ||||| || ||||| |||||||||
Sbjct: 606 tggaaacaagtgcaaaagatgctacaaatgtcgaacaggcatttatggctatggctgctt 665
Query: 503 aaattaaaaacagaatggcaagccaaccagtgaacaatgcaaggcctccaacagt 557
||||| || ||||||||||||||||| | |||||||||||||||||||||||
Sbjct: 666 ccattaagaatagaatggcaagccaacctgcaaacaatgcaaggcctccaacagt 720
>gnl|LJGI|AU089325 UniRef100_Q40204 Cluster: RAB1D; n=1; Lotus japonicus|Rep: RAB1D -
Lotus japonicus, partial (79%)
Length = 757
Score = 291 bits (147), Expect = 3e-78
Identities = 378/455 (83%)
Strand = Plus / Plus
Query: 1 atgaatcctgaatacgactatttgttcaagcttttgctgattggagattctggtgtaggc 60
|||||||| || || || ||| |||||||||| | || |||||||| |||||||| ||
Sbjct: 48 atgaatcccgagtatgattatctgttcaagctccttcttattggagactctggtgttgga 107
Query: 61 aagtcatgtcttctcctgaggtttgctgatgattcataccttgacagctatatcagtacc 120
|| ||||| ||||| ||||| |||||||||||||| ||| |||| ||||| || || |||
Sbjct: 108 aaatcatgccttcttctgagatttgctgatgattcttacattgaaagctacataagcacc 167
Query: 121 attggagtggactttaaaatccgaactgttgagcaggatggaaagactattaaacttcaa 180
|| ||||| || |||||||| || |||||||||||||||| |||||| |||||||| ||
Sbjct: 168 atcggagttgattttaaaattcgcactgttgagcaggatgcaaagaccattaaactacag 227
Query: 181 atttgggacactgctggtcaagaacgtttccggacaatcacaagcagctactaccgtggg 240
|||||||| |||||||| ||||| ||||| ||||||| || || |||||||| ||||||
Sbjct: 228 atttgggatactgctgggcaagagcgttttaggacaataaccagtagctactatcgtggg 287
Query: 241 gctcatggcataattgttgtttatgatgtcactgaccaagagagcttcaacaatgttaag 300
|||||||| || ||| |||||||||| || || || ||||||||||||| ||||| |||
Sbjct: 288 gctcatggaatcattattgtttatgacgtaacagatgaagagagcttcaataatgtaaag 347
Query: 301 caatggctgaatgaaattgaccgttatgcaagtgaaaacgttaacaagcttctagttgga 360
|||||||| | |||||||||||| ||||| ||||| || |||||||| ||| | |||||
Sbjct: 348 caatggctcagtgaaattgaccgctatgccagtgataatgttaacaaacttttggttggg 407
Query: 361 aacaagtgtgatctcacggcaaataaagttgtgtcctatgagacagcaaaggcatttgca 420
|| ||||||||||| || ||||||| || || || ||||| ||||| || | ||||||
Sbjct: 408 aataagtgtgatctgacagcaaatagagcggtctcatatgatacagctaaagagtttgca 467
Query: 421 gatgaaattggaattcctttcatggaaactagtgc 455
||| ||||||| || ||||| ||||||||||||||
Sbjct: 468 gatcaaattggcataccttttatggaaactagtgc 502
>gnl|LJGI|TC81089 homologue to UniRef100_Q40203 Cluster: RAB1C; n=1; Lotus
japonicus|Rep: RAB1C - Lotus japonicus, partial (40%)
Length = 827
Score = 264 bits (133), Expect = 6e-70
Identities = 136/137 (99%)
Strand = Plus / Plus
Query: 308 tgaatgaaattgaccgttatgcaagtgaaaacgttaacaagcttctagttggaaacaagt 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgaatgaaattgaccgttatgcaagtgaaaacgttaacaagcttctagttggaaacaagt 60
Query: 368 gtgatctcacggcaaataaagttgtgtcctatgagacagcaaaggcatttgcagatgaaa 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtgatctcacggcaaataaagttgtgtcctatgagacagcaaaggcatttgcagatgaaa 120
Query: 428 ttggaattcctttcatg 444
|||||||||||| ||||
Sbjct: 121 ttggaattccttccatg 137
Score = 230 bits (116), Expect = 8e-60
Identities = 116/116 (100%)
Strand = Plus / Plus
Query: 497 ctgctgaaattaaaaacagaatggcaagccaaccagtgaacaatgcaaggcctccaacag 556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 ctgctgaaattaaaaacagaatggcaagccaaccagtgaacaatgcaaggcctccaacag 202
Query: 557 tccaaatccgaggacagccagtgaatcaaaagtctggttgctgctcgtcttagaga 612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 tccaaatccgaggacagccagtgaatcaaaagtctggttgctgctcgtcttagaga 258
>gnl|LJGI|AV773071 homologue to UniRef100_Q40203 Cluster: RAB1C; n=1; Lotus
japonicus|Rep: RAB1C - Lotus japonicus, partial (19%)
Length = 487
Score = 176 bits (89), Expect = 1e-43
Identities = 123/133 (92%), Gaps = 1/133 (0%)
Strand = Plus / Minus
Query: 481 gctttcatggccatggctgctgaaattaaaaacagaatggcaagccaaccagtgaacaat 540
|||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 487 gctttcatggccatggctgctgaaattaaaaacagaatggcaagcccacccgtgaacaat 428
Query: 541 gcaaggcctccaacagtccaaatccgaggacagccagtga-atcaaaagtctggttgctg 599
||||||||||| | |||| |||||||||||||||| ||| ||| |||||||||||||||
Sbjct: 427 gcaaggcctccccccgtcccaatccgaggacagccactgacatctaaagtctggttgctg 368
Query: 600 ctcgtcttagaga 612
||||| |||||||
Sbjct: 367 ctcgttttagaga 355
>gnl|LJGI|DC594000 UniRef100_Q40205 Cluster: RAB1E; n=1; Lotus japonicus|Rep: RAB1E -
Lotus japonicus, partial (30%)
Length = 493
Score = 107 bits (54), Expect = 8e-23
Identities = 129/154 (83%)
Strand = Plus / Plus
Query: 23 tgttcaagcttttgctgattggagattctggtgtaggcaagtcatgtcttctcctgaggt 82
|||||||||| | || ||||| || |||||||| ||||| ||||| ||||| ||||| |
Sbjct: 149 tgttcaagctccttcttattggtgactctggtgttggcaaatcatgccttcttctgagat 208
Query: 83 ttgctgatgattcataccttgacagctatatcagtaccattggagtggactttaaaatcc 142
||||||||||||||||| |||| ||||| || || || |||||||| || |||||||| |
Sbjct: 209 ttgctgatgattcatacattgagagctacataagcacaattggagttgattttaaaatac 268
Query: 143 gaactgttgagcaggatggaaagactattaaact 176
| || ||||||||||||| ||| || ||||||||
Sbjct: 269 gcaccgttgagcaggatgcaaaaaccattaaact 302
>gnl|LJGI|TC67279 UniRef100_Q40201 Cluster: RAB1A; n=1; Lotus japonicus|Rep: RAB1A -
Lotus japonicus, complete
Length = 956
Score = 85.7 bits (43), Expect = 3e-16
Identities = 124/151 (82%)
Strand = Plus / Plus
Query: 181 atttgggacactgctggtcaagaacgtttccggacaatcacaagcagctactaccgtggg 240
|||||||| |||||||| || || || ||| |||| || |||||||| ||||| | ||
Sbjct: 231 atttgggatactgctggacaggagcgcttcaggactataacaagcagttactatagagga 290
Query: 241 gctcatggcataattgttgtttatgatgtcactgaccaagagagcttcaacaatgttaag 300
|| ||||| |||||| |||| |||||||||||||| || |||||||||||||| |||
Sbjct: 291 gcacatggaataattattgtctatgatgtcactgagatggaaagcttcaacaatgtcaag 350
Query: 301 caatggctgaatgaaattgaccgttatgcaa 331
|| ||| |||||||||||||| | |||||||
Sbjct: 351 cagtggttgaatgaaattgacagatatgcaa 381
>gnl|LJGI|TC57519 UniRef100_Q40201 Cluster: RAB1A; n=1; Lotus japonicus|Rep: RAB1A -
Lotus japonicus, complete
Length = 885
Score = 85.7 bits (43), Expect = 3e-16
Identities = 124/151 (82%)
Strand = Plus / Plus
Query: 181 atttgggacactgctggtcaagaacgtttccggacaatcacaagcagctactaccgtggg 240
|||||||| |||||||| || || || ||| |||| || |||||||| ||||| | ||
Sbjct: 309 atttgggatactgctggacaggagcgcttcaggactataacaagcagttactatagagga 368
Query: 241 gctcatggcataattgttgtttatgatgtcactgaccaagagagcttcaacaatgttaag 300
|| ||||| |||||| |||| |||||||||||||| || |||||||||||||| |||
Sbjct: 369 gcacatggaataattattgtctatgatgtcactgagatggaaagcttcaacaatgtcaag 428
Query: 301 caatggctgaatgaaattgaccgttatgcaa 331
|| ||| |||||||||||||| | |||||||
Sbjct: 429 cagtggttgaatgaaattgacagatatgcaa 459