Miyakogusa Predicted Gene
- Lj0g3v0303389.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0303389.2 Non Chatacterized Hit- tr|C5YBT5|C5YBT5_SORBI
Putative uncharacterized protein Sb06g001200
OS=Sorghu,27.93,4e-18,Transposase_24,Transposase, Ptta/En/Spm, plant;
coiled-coil,NULL; seg,NULL,CUFF.20402.2
(2202 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60325 1689 0.0
gnl|LJGI|FS338715 similar to UniRef100_Q8TY17 Cluster: Uncharact... 1029 0.0
gnl|LJGI|BP056618 991 0.0
gnl|LJGI|TC66580 529 e-149
>gnl|LJGI|TC60325
Length = 987
Score = 1689 bits (852), Expect = 0.0
Identities = 861/864 (99%)
Strand = Plus / Plus
Query: 1 atgcctcgtaaggccaaacgctccaagaaaggtgttgcggccaagggacgaactagagca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 atgcctcgtaaggccaaacgctccaagaaaggtgttgcggccaagggacgaactagagca 183
Query: 61 tctaatggcacatcaaatttgatgcctcaatcttcttctcaaggacattctgtacatcta 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 184 tctaatggcacatcaaatttgatgcctcaagcttcttctcaaggacattctgtacatcta 243
Query: 121 gaaccacaaccacaccttttagagccaacaccacctcaggctcctgttccaccattgggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 gaaccacaaccacaccttttagagccaacaccacctcaggctcctgttccaccattgggt 303
Query: 181 agtacaccacattctctggcacatccatcagcttctacccgacaaccacacgccacaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 304 agtacaccacattctctggcacatccatcagcttctacccgacaaccacacaccacaaaa 363
Query: 241 ctcaatggttgtttggttgtggctgaggcacgaactagagcatctcatggcgcatcaaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 ctcaatggttgtttggttgtggctgaggcacgaactagagcatctcatggcgcatcaaat 423
Query: 301 ttgatggctcaagcttcatctcaaggacattctgtacctctagagccacaatcacacctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 ttgatggctcaagcttcatctcaaggacattctgtacctctagagccacaatcacacctt 483
Query: 361 ttagagccaacaccagctcaggctctggttccaccattgggtagtacaccacattctctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 ttagagccaacaccagctcaggctctggttccaccattgggtagtacaccacattctctg 543
Query: 421 gctcctccatcagctccattgggtagtgtaccacatgctttggcacctccatcagctcct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 gctcctccatcagctccattgggtagtgtaccacatgctttggcacctccatcagctcct 603
Query: 481 acccgacaaccacacgccacaaaaagcctttcctcctctacaagacgcatgcctattaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 acccgacaaccacacgccacaaaaagcctttcctcctctacaagacgcatgcctattaaa 663
Query: 541 gaaaaacattcaaagactggtgttgcaaccaaggcaccgcctagtgtatctcatggcaca 600
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 gaaaaacattcaaagaatggtgttgcaaccaaggcaccgcctagtgtatctcatggcaca 723
Query: 601 tcaaatgtgatgcctcaaacttcatctcaaggatattctatatctgaggatccacaacca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 tcaaatgtgatgcctcaaacttcatctcaaggatattctatatctgaggatccacaacca 783
Query: 661 gaccttttagagtctacactgggtccactattgtatgatctgactcctccatgggcttct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 gaccttttagagtctacactgggtccactattgtatgatctgactcctccatgggcttct 843
Query: 721 actcgtgccgcaaagcgtcgtgggttcagtggagttttggatctacaagccaaaggcatg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 844 actcgtgccgcaaagcgtcgtgggttcagtggagttttggatctacaagccaaaggcatg 903
Query: 781 cctcatgaagccgaacgttcaaagaatggtattgctactagggcaccatctcgaatatct 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 904 cctcatgaagccgaacgttcaaagaatggtattgctactagggcaccatctcgaatatct 963
Query: 841 catggcacatcaaatatgttgtct 864
||||||||||||||||||||||||
Sbjct: 964 catggcacatcaaatatgttgtct 987
Score = 111 bits (56), Expect = 2e-23
Identities = 131/156 (83%)
Strand = Plus / Plus
Query: 837 atctcatggcacatcaaatatgttgtctcaagcttcatctcacagacattctgttccggt 896
|||||||||| |||||||| || || |||||||||||||||| |||||||||| || |
Sbjct: 405 atctcatggcgcatcaaatttgatggctcaagcttcatctcaaggacattctgtacctct 464
Query: 897 ggagccacaagaagaccttttagagccgacactgcctcagcctgtggttccacctttggg 956
||||||||| | ||||||||||||| |||| ||||| || |||||||||| |||||
Sbjct: 465 agagccacaatcacaccttttagagccaacaccagctcaggctctggttccaccattggg 524
Query: 957 tagtacaccacagggtctgactcctccatcggctcc 992
|||||||||||| |||| |||||||||| |||||
Sbjct: 525 tagtacaccacattctctggctcctccatcagctcc 560
Score = 91.7 bits (46), Expect = 2e-17
Identities = 82/94 (87%)
Strand = Plus / Plus
Query: 1093 tctcatggcacatcaaatttgatgtctcaagcttcatctcaagtacattctgatcatgtg 1152
||||||||| |||||||||||||| |||||||||||||||||| |||||||| | | |
Sbjct: 406 tctcatggcgcatcaaatttgatggctcaagcttcatctcaaggacattctgtacctcta 465
Query: 1153 gagccacaaccacacgttttagagctgacaccag 1186
||||||||| ||||| ||||||||| |||||||
Sbjct: 466 gagccacaatcacaccttttagagccaacaccag 499
Score = 89.7 bits (45), Expect = 7e-17
Identities = 72/81 (88%)
Strand = Plus / Plus
Query: 1097 atggcacatcaaatttgatgtctcaagcttcatctcaagtacattctgatcatgtggagc 1156
|||||||||||||||||||| |||||||||| ||||||| |||||||| ||| | || |
Sbjct: 188 atggcacatcaaatttgatgcctcaagcttcttctcaaggacattctgtacatctagaac 247
Query: 1157 cacaaccacacgttttagagc 1177
||||||||||| |||||||||
Sbjct: 248 cacaaccacaccttttagagc 268
Score = 61.9 bits (31), Expect = 2e-08
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 1093 tctcatggcacatcaaatttgatgtctcaagcttcatctcaag 1135
|||||||||||||||||| ||||| ||||| ||||||||||||
Sbjct: 712 tctcatggcacatcaaatgtgatgcctcaaacttcatctcaag 754
Score = 58.0 bits (29), Expect = 2e-07
Identities = 107/133 (80%)
Strand = Plus / Plus
Query: 798 ttcaaagaatggtattgctactagggcaccatctcgaatatctcatggcacatcaaatat 857
||||||||||||| |||| || | |||||| || | |||||||||||||||||||| |
Sbjct: 672 ttcaaagaatggtgttgcaaccaaggcaccgcctagtgtatctcatggcacatcaaatgt 731
Query: 858 gttgtctcaagcttcatctcacagacattctgttccggtggagccacaagaagacctttt 917
| || ||||| |||||||||| || ||||| | | | ||| |||||| |||||||||
Sbjct: 732 gatgcctcaaacttcatctcaaggatattctatatctgaggatccacaaccagacctttt 791
Query: 918 agagccgacactg 930
|||| | ||||||
Sbjct: 792 agagtctacactg 804
>gnl|LJGI|FS338715 similar to UniRef100_Q8TY17 Cluster: Uncharacterized protein; n=1;
Methanopyrus kandleri|Rep: Uncharacterized protein -
Methanopyrus kandleri, partial (8%)
Length = 739
Score = 1029 bits (519), Expect = 0.0
Identities = 531/535 (99%)
Strand = Plus / Plus
Query: 1 atgcctcgtaaggccaaacgctccaagaaaggtgttgcggccaagggacgaactagagca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 atgcctcgtaaggccaaacgctccaagaaaggtgttgcggccaagggacgaactagagca 264
Query: 61 tctaatggcacatcaaatttgatgcctcaatcttcttctcaaggacattctgtacatcta 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 265 tctaatggcacatcaaatttgatgcctcaagcttcttctcaaggacattctgtacatcta 324
Query: 121 gaaccacaaccacaccttttagagccaacaccacctcaggctcctgttccaccattgggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gaaccacaaccacaccttttagagccaacaccacctcaggctcctgttccaccattgggt 384
Query: 181 agtacaccacattctctggcacatccatcagcttctacccgacaaccacacgccacaaaa 240
||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 385 agtacaccacattctctggcacatccatcagcttccacccgacaaccacacaccacaaaa 444
Query: 241 ctcaatggttgtttggttgtggctgaggcacgaactagagcatctcatggcgcatcaaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctcaatggttgtttggttgtggctgaggcacgaactagagcatctcatggcgcatcaaat 504
Query: 301 ttgatggctcaagcttcatctcaaggacattctgtacctctagagccacaatcacacctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttgatggctcaagcttcatctcaaggacattctgtacctctagagccacaatcacacctt 564
Query: 361 ttagagccaacaccagctcaggctctggttccaccattgggtagtacaccacattctctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ttagagccaacaccagctcaggctctggttccaccattgggtagtacaccacattctctg 624
Query: 421 gctcctccatcagctccattgggtagtgtaccacatgctttggcacctccatcagctcct 480
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 625 gctcctccatcagctccattgggtagtgcaccacatgctttggcacctccatcagctcct 684
Query: 481 acccgacaaccacacgccacaaaaagcctttcctcctctacaagacgcatgccta 535
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 acccgacaaccacacgccacaaaaagcctttcctcctctacaagacgcatgccta 739
Score = 111 bits (56), Expect = 2e-23
Identities = 131/156 (83%)
Strand = Plus / Plus
Query: 837 atctcatggcacatcaaatatgttgtctcaagcttcatctcacagacattctgttccggt 896
|||||||||| |||||||| || || |||||||||||||||| |||||||||| || |
Sbjct: 486 atctcatggcgcatcaaatttgatggctcaagcttcatctcaaggacattctgtacctct 545
Query: 897 ggagccacaagaagaccttttagagccgacactgcctcagcctgtggttccacctttggg 956
||||||||| | ||||||||||||| |||| ||||| || |||||||||| |||||
Sbjct: 546 agagccacaatcacaccttttagagccaacaccagctcaggctctggttccaccattggg 605
Query: 957 tagtacaccacagggtctgactcctccatcggctcc 992
|||||||||||| |||| |||||||||| |||||
Sbjct: 606 tagtacaccacattctctggctcctccatcagctcc 641
Score = 91.7 bits (46), Expect = 2e-17
Identities = 82/94 (87%)
Strand = Plus / Plus
Query: 1093 tctcatggcacatcaaatttgatgtctcaagcttcatctcaagtacattctgatcatgtg 1152
||||||||| |||||||||||||| |||||||||||||||||| |||||||| | | |
Sbjct: 487 tctcatggcgcatcaaatttgatggctcaagcttcatctcaaggacattctgtacctcta 546
Query: 1153 gagccacaaccacacgttttagagctgacaccag 1186
||||||||| ||||| ||||||||| |||||||
Sbjct: 547 gagccacaatcacaccttttagagccaacaccag 580
Score = 89.7 bits (45), Expect = 7e-17
Identities = 72/81 (88%)
Strand = Plus / Plus
Query: 1097 atggcacatcaaatttgatgtctcaagcttcatctcaagtacattctgatcatgtggagc 1156
|||||||||||||||||||| |||||||||| ||||||| |||||||| ||| | || |
Sbjct: 269 atggcacatcaaatttgatgcctcaagcttcttctcaaggacattctgtacatctagaac 328
Query: 1157 cacaaccacacgttttagagc 1177
||||||||||| |||||||||
Sbjct: 329 cacaaccacaccttttagagc 349
Score = 65.9 bits (33), Expect = 1e-09
Identities = 72/85 (84%)
Strand = Plus / Plus
Query: 588 atctcatggcacatcaaatgtgatgcctcaaacttcatctcaaggatattctatatctga 647
|||| |||||||||||||| ||||||||||| |||| ||||||||| ||||| || |
Sbjct: 264 atctaatggcacatcaaatttgatgcctcaagcttcttctcaaggacattctgtacatct 323
Query: 648 ggatccacaaccagaccttttagag 672
|| ||||||||| |||||||||||
Sbjct: 324 agaaccacaaccacaccttttagag 348
Score = 65.9 bits (33), Expect = 1e-09
Identities = 72/85 (84%)
Strand = Plus / Plus
Query: 588 atctcatggcacatcaaatgtgatgcctcaaacttcatctcaaggatattctatatctga 647
|||||||||| |||||||| ||||| ||||| |||||||||||||| ||||| || ||
Sbjct: 486 atctcatggcgcatcaaatttgatggctcaagcttcatctcaaggacattctgtacctct 545
Query: 648 ggatccacaaccagaccttttagag 672
|| |||||| || |||||||||||
Sbjct: 546 agagccacaatcacaccttttagag 570
>gnl|LJGI|BP056618
Length = 524
Score = 991 bits (500), Expect = 0.0
Identities = 523/527 (99%), Gaps = 3/527 (0%)
Strand = Plus / Minus
Query: 1021 cattcctcacaagctaaagacatacttcgtaaagccaaacgtttaaagaatggtgttgct 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 cattcctcacaagctaaagacatacttcgtaaagccaaacgtttaaagaatggtgttgct 465
Query: 1081 acaagggcaccctctcatggcacatcaaatttgatgtctcaagcttcatctcaagtacat 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 acaagggcaccctctcatggcacatcaaatttgatgtctcaagcttcatctcaagtacat 405
Query: 1141 tctgatcatgtggagccacaaccacacgttttagagctgacaccagatgctctatctcct 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 tctgatcatgtggagccacaaccacacgttttagagctgacaccagatgctctatctcct 345
Query: 1201 ccattggctcctcctcaatcatcacgttcctccaaacgccgctcctccaaaccagggcgt 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 ccattggctcctcctcaatcatcacgttcctccaaacgccgctcctccaaaccagggcgt 285
Query: 1261 gagtgcgctagagcatggactgtacaagctatagatgaacaaggcaacgaaatgaagatt 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 gagtgcgctagagcatggactgtacaagctatagatgaacaaggcaacgaaatgaagatt 225
Query: 1321 caagtgacgaatccgggtgtatttgatatgcctcaaggtcagcgcatagtggtaccattt 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 caagtgacgaatccgggtgtatttgatatgcctcaaggtcagcgcatagtggtaccattt 165
Query: 1381 gataggcaaatgcgagcctgtggagaagcagcagcactcctttcaggagcttgtggacgt 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 gataggcaaatgcgagcctgtggagaagcagcagcactcctttcaggagcttgtggacgt 105
Query: 1441 atttccaccaaacctgataatattccaatctattttgaaagctggccaaaagtacctgat 1500
||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 104 atttccaccaaacctgataatattccantctattttgaaagctggcc-aaagtacctgat 46
Query: 1501 tcatacaaaaaagaatgctttaacgctttgaagaatctttttcattt 1547
|||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 45 tcatac-aaaaagaatgctttaacgctttgaag-atctttttcattt 1
Score = 91.7 bits (46), Expect = 2e-17
Identities = 82/94 (87%)
Strand = Plus / Minus
Query: 283 tctcatggcgcatcaaatttgatggctcaagcttcatctcaaggacattctgtacctcta 342
||||||||| |||||||||||||| |||||||||||||||||| |||||||| | | |
Sbjct: 452 tctcatggcacatcaaatttgatgtctcaagcttcatctcaagtacattctgatcatgtg 393
Query: 343 gagccacaatcacaccttttagagccaacaccag 376
||||||||| ||||| ||||||||| |||||||
Sbjct: 392 gagccacaaccacacgttttagagctgacaccag 359
Score = 81.8 bits (41), Expect = 2e-14
Identities = 71/81 (87%)
Strand = Plus / Minus
Query: 65 atggcacatcaaatttgatgcctcaatcttcttctcaaggacattctgtacatctagaac 124
|||||||||||||||||||| ||||| |||| ||||||| |||||||| ||| | || |
Sbjct: 448 atggcacatcaaatttgatgtctcaagcttcatctcaagtacattctgatcatgtggagc 389
Query: 125 cacaaccacaccttttagagc 145
||||||||||| |||||||||
Sbjct: 388 cacaaccacacgttttagagc 368
Score = 77.8 bits (39), Expect = 3e-13
Identities = 78/91 (85%)
Strand = Plus / Minus
Query: 838 tctcatggcacatcaaatatgttgtctcaagcttcatctcacagacattctgttccggtg 897
|||||||||||||||||| || ||||||||||||||||||| |||||||| || |||
Sbjct: 452 tctcatggcacatcaaatttgatgtctcaagcttcatctcaagtacattctgatcatgtg 393
Query: 898 gagccacaagaagaccttttagagccgacac 928
||||||||| | || ||||||||| |||||
Sbjct: 392 gagccacaaccacacgttttagagctgacac 362
Score = 61.9 bits (31), Expect = 2e-08
Identities = 40/43 (93%)
Strand = Plus / Minus
Query: 589 tctcatggcacatcaaatgtgatgcctcaaacttcatctcaag 631
|||||||||||||||||| ||||| ||||| ||||||||||||
Sbjct: 452 tctcatggcacatcaaatttgatgtctcaagcttcatctcaag 410
>gnl|LJGI|TC66580
Length = 724
Score = 529 bits (267), Expect = e-149
Identities = 267/267 (100%)
Strand = Plus / Plus
Query: 1936 attgtggagaaacttgaagaacaattaggtcaactcgttaatacttcagaaattgcatca 1995
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 attgtggagaaacttgaagaacaattaggtcaactcgttaatacttcagaaattgcatca 60
Query: 1996 aatgatgctcttgctaaagtattgggaccagatcacgctggacgtgtacgtagcttaggc 2055
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aatgatgctcttgctaaagtattgggaccagatcacgctggacgtgtacgtagcttaggc 120
Query: 2056 ctaggaggtcttcacagtgttgcatttgcgtccaccaccacgcgattcagtgtgttaggg 2115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctaggaggtcttcacagtgttgcatttgcgtccaccaccacgcgattcagtgtgttaggg 180
Query: 2116 aatctatcaaacactgatacagctgaaccttctcaattgaaagaagaggtcgacagtttg 2175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aatctatcaaacactgatacagctgaaccttctcaattgaaagaagaggtcgacagtttg 240
Query: 2176 aggctcaagttagcatcgtatgaggag 2202
|||||||||||||||||||||||||||
Sbjct: 241 aggctcaagttagcatcgtatgaggag 267