Miyakogusa Predicted Gene
- Lj0g3v0302789.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0302789.1 Non Chatacterized Hit- tr|I1KIC5|I1KIC5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.54821
PE,77.78,0,DUF296,Domain of unknown function DUF296; seg,NULL;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;,CUFF.20357.1
(1002 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS334108 similar to UniRef100_A7PZC7 Cluster: Chromosom... 920 0.0
gnl|LJGI|TC63617 similar to UniRef100_A7PZC7 Cluster: Chromosome... 916 0.0
gnl|LJGI|FS340237 homologue to UniRef100_A7TUG5 Cluster: AT-hook... 668 0.0
gnl|LJGI|GO011982 similar to UniRef100_A7PZC7 Cluster: Chromosom... 597 e-170
gnl|LJGI|TC80133 similar to UniRef100_A7PZC7 Cluster: Chromosome... 543 e-154
gnl|LJGI|TC69857 similar to UniRef100_A7PZC7 Cluster: Chromosome... 416 e-115
gnl|LJGI|TC73109 similar to UniRef100_A7PZC7 Cluster: Chromosome... 392 e-108
gnl|LJGI|BP048633 78 1e-13
>gnl|LJGI|FS334108 similar to UniRef100_A7PZC7 Cluster: Chromosome chr15 scaffold_40,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr15 scaffold_40, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (28%)
Length = 726
Score = 920 bits (464), Expect = 0.0
Identities = 464/464 (100%)
Strand = Plus / Plus
Query: 1 atggatcgaggggaccaaatggcgtcatactatatgcagagaggaatacctggtgctgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 atggatcgaggggaccaaatggcgtcatactatatgcagagaggaatacctggtgctgct 322
Query: 61 gggaaccaacctgaattgcttaattcatcgagtattcagccactgcctaaccctaatcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gggaaccaacctgaattgcttaattcatcgagtattcagccactgcctaaccctaatcca 382
Query: 121 caatttcaatcaaacattggaggtggtaccattggatccacattgccattagaatcttct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 caatttcaatcaaacattggaggtggtaccattggatccacattgccattagaatcttct 442
Query: 181 ggaatttcatctcaatgtgtcaatgtgggggctccttctggggcacctgtcaaaaggaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ggaatttcatctcaatgtgtcaatgtgggggctccttctggggcacctgtcaaaaggaag 502
Query: 241 agagggagacctagaaaatatgggtctggtcaaggaactgtgtcattggcattgactcca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 agagggagacctagaaaatatgggtctggtcaaggaactgtgtcattggcattgactcca 562
Query: 301 acaccagctactcatcctggaacctttacacaaggccagaaaaggggtagagggcgcccc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 acaccagctactcatcctggaacctttacacaaggccagaaaaggggtagagggcgcccc 622
Query: 361 cctgggtctgggaagaaacagcaattggcttctctaggtgaattggtgtctggttcagcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 cctgggtctgggaagaaacagcaattggcttctctaggtgaattggtgtctggttcagcc 682
Query: 421 gggatgggtttcactcctcatgtcatcactgtagcaattggaga 464
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 gggatgggtttcactcctcatgtcatcactgtagcaattggaga 726
>gnl|LJGI|TC63617 similar to UniRef100_A7PZC7 Cluster: Chromosome chr15 scaffold_40,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr15 scaffold_40, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (27%)
Length = 864
Score = 916 bits (462), Expect = 0.0
Identities = 465/466 (99%)
Strand = Plus / Plus
Query: 1 atggatcgaggggaccaaatggcgtcatactatatgcagagaggaatacctggtgctgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 atggatcgaggggaccaaatggcgtcatactatatgcagagaggaatacctggtgctgct 335
Query: 61 gggaaccaacctgaattgcttaattcatcgagtattcagccactgcctaaccctaatcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 gggaaccaacctgaattgcttaattcatcgagtattcagccactgcctaaccctaatcca 395
Query: 121 caatttcaatcaaacattggaggtggtaccattggatccacattgccattagaatcttct 180
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 396 caatttcaatcaaacattggaggtggtaccattggatccacattaccattagaatcttct 455
Query: 181 ggaatttcatctcaatgtgtcaatgtgggggctccttctggggcacctgtcaaaaggaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 ggaatttcatctcaatgtgtcaatgtgggggctccttctggggcacctgtcaaaaggaag 515
Query: 241 agagggagacctagaaaatatgggtctggtcaaggaactgtgtcattggcattgactcca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 agagggagacctagaaaatatgggtctggtcaaggaactgtgtcattggcattgactcca 575
Query: 301 acaccagctactcatcctggaacctttacacaaggccagaaaaggggtagagggcgcccc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 acaccagctactcatcctggaacctttacacaaggccagaaaaggggtagagggcgcccc 635
Query: 361 cctgggtctgggaagaaacagcaattggcttctctaggtgaattggtgtctggttcagcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 cctgggtctgggaagaaacagcaattggcttctctaggtgaattggtgtctggttcagcc 695
Query: 421 gggatgggtttcactcctcatgtcatcactgtagcaattggagaag 466
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 gggatgggtttcactcctcatgtcatcactgtagcaattggagaag 741
>gnl|LJGI|FS340237 homologue to UniRef100_A7TUG5 Cluster: AT-hook DNA-binding protein;
n=1; Gossypium hirsutum|Rep: AT-hook DNA-binding protein
- Gossypium hirsutum (Upland cotton) (Gossypium
mexicanum), partial (9%)
Length = 772
Score = 668 bits (337), Expect = 0.0
Identities = 337/337 (100%)
Strand = Plus / Plus
Query: 1 atggatcgaggggaccaaatggcgtcatactatatgcagagaggaatacctggtgctgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 atggatcgaggggaccaaatggcgtcatactatatgcagagaggaatacctggtgctgct 495
Query: 61 gggaaccaacctgaattgcttaattcatcgagtattcagccactgcctaaccctaatcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 gggaaccaacctgaattgcttaattcatcgagtattcagccactgcctaaccctaatcca 555
Query: 121 caatttcaatcaaacattggaggtggtaccattggatccacattgccattagaatcttct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 caatttcaatcaaacattggaggtggtaccattggatccacattgccattagaatcttct 615
Query: 181 ggaatttcatctcaatgtgtcaatgtgggggctccttctggggcacctgtcaaaaggaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 ggaatttcatctcaatgtgtcaatgtgggggctccttctggggcacctgtcaaaaggaag 675
Query: 241 agagggagacctagaaaatatgggtctggtcaaggaactgtgtcattggcattgactcca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 agagggagacctagaaaatatgggtctggtcaaggaactgtgtcattggcattgactcca 735
Query: 301 acaccagctactcatcctggaacctttacacaaggcc 337
|||||||||||||||||||||||||||||||||||||
Sbjct: 736 acaccagctactcatcctggaacctttacacaaggcc 772
>gnl|LJGI|GO011982 similar to UniRef100_A7PZC7 Cluster: Chromosome chr15 scaffold_40,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr15 scaffold_40, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (27%)
Length = 525
Score = 597 bits (301), Expect = e-170
Identities = 442/488 (90%), Gaps = 12/488 (2%)
Strand = Plus / Plus
Query: 1 atggatcgaggggaccaaatggcgtcatactatatgcagagaggaatacctggtgctgct 60
|||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||
Sbjct: 39 atggatcgaggggaccaaatggcgtcttactatatgcagagaggaatgcctggtggtgct 98
Query: 61 gggaaccaacct------gaattgcttaattcatcgagtattcagccactgcc---taac 111
|| ||||||||| ||||||| ||||||||||||||||| |||||| | |||
Sbjct: 99 ggaaaccaacctcaaccagaattgcataattcatcgagtattcgtccactgtcgaataat 158
Query: 112 cctaatccacaatttcaatcaaacattggaggtggtaccattggatccacattgccatta 171
||||||| | ||||||||||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 159 cctaatctatcatttcaatcaaacatcggaggtggtgccattggatccacattgccatta 218
Query: 172 gaatcttctggaatttcatctcaatgtgtcaatgtgggggctccttctggggcacctgtc 231
|||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 219 gaatcttcaggaatttcgtctcaatgtgtcaatgtgggggctccttctggggaacctgcc 278
Query: 232 aaaaggaagagagggagacctagaaaatatgggtctggtcaaggaactgtgtcattggca 291
|||||||||||||| |||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 279 aaaaggaagagaggaagacctagaaaatatgggtctg---atggaactgtgtcattggca 335
Query: 292 ttgactccaacaccagctactcatcctggaacctttacacaaggccagaaaaggggtaga 351
||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 336 ttgactccaacaccagctactcatcctggaacccttacacaaggccagaaacggggtaga 395
Query: 352 gggcgcccccctgggtctgggaagaaacagcaattggcttctctaggtgaattggtgtct 411
||||||||||| ||||| ||||| ||||||||||||||||||||||||| || ||||
Sbjct: 396 gggcgccccccagggtccgggaaaaaacagcaattggcttctctaggtgtggtgacgtct 455
Query: 412 ggttcagccgggatgggtttcactcctcatgtcatcactgtagcaattggagaagacatt 471
|||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 456 ggttcagccgggatgggtttcactcctcatgtcatcaccattgcaattggagaagacatc 515
Query: 472 gcaacaaa 479
||||||||
Sbjct: 516 gcaacaaa 523
>gnl|LJGI|TC80133 similar to UniRef100_A7PZC7 Cluster: Chromosome chr15 scaffold_40,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr15 scaffold_40, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 736
Score = 543 bits (274), Expect = e-154
Identities = 274/274 (100%)
Strand = Plus / Plus
Query: 729 tggagtgcttattgcagcaagtctgattcaggtgatagttgggagcttcatgtggggtgg 788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tggagtgcttattgcagcaagtctgattcaggtgatagttgggagcttcatgtggggtgg 60
Query: 789 atcaaagacaaagaacaaaaacaaacaagattcagaaaatgcagaagttgctatggagtc 848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atcaaagacaaagaacaaaaacaaacaagattcagaaaatgcagaagttgctatggagtc 120
Query: 849 agatcatcatgcagttcacaatccagttgcagtgaatagcatttcttcaaatcaaaatct 908
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agatcatcatgcagttcacaatccagttgcagtgaatagcatttcttcaaatcaaaatct 180
Query: 909 tactccaatctcatctctaagttcttggccggcatcgcgtcaattggatatgcgtaattc 968
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tactccaatctcatctctaagttcttggccggcatcgcgtcaattggatatgcgtaattc 240
Query: 969 ccatattggcattgatttaatgcgtgggtgacaa 1002
||||||||||||||||||||||||||||||||||
Sbjct: 241 ccatattggcattgatttaatgcgtgggtgacaa 274
>gnl|LJGI|TC69857 similar to UniRef100_A7PZC7 Cluster: Chromosome chr15 scaffold_40,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr15 scaffold_40, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 739
Score = 416 bits (210), Expect = e-115
Identities = 321/357 (89%), Gaps = 12/357 (3%)
Strand = Plus / Plus
Query: 1 atggatcgaggggaccaaatggcgtcatactatatgcagagaggaatacctggtgctgct 60
|||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||
Sbjct: 293 atggatcgaggggaccaaatggcgtcttactatatgcagagaggaatgcctggtggtgct 352
Query: 61 gggaaccaacct------gaattgcttaattcatcgagtattcagccactgcc---taac 111
|| ||||||||| ||||||| ||||||||||||||||| ||||| | |||
Sbjct: 353 ggaaaccaacctcaaccagaattgcataattcatcgagtattcgtccactatcgaataat 412
Query: 112 cctaatccacaatttcaatcaaacattggaggtggtaccattggatccacattgccatta 171
||||||| | ||||||||||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 413 cctaatctatcatttcaatcaaacatcggaggtggtgccattggatccacattgccatta 472
Query: 172 gaatcttctggaatttcatctcaatgtgtcaatgtgggggctccttctggggcacctgtc 231
|||||||| |||||||| || ||||||||||||||||||||||||||||||| ||||| |
Sbjct: 473 gaatcttcaggaatttcgtcccaatgtgtcaatgtgggggctccttctggggaacctgcc 532
Query: 232 aaaaggaagagagggagacctagaaaatatgggtctggtcaaggaactgtgtcattggca 291
|||||||||||||| |||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 533 aaaaggaagagaggaagacctagaaaatatgggtctg---atggaactgtgtcattggca 589
Query: 292 ttgactccaacaccagctactcatcctggaacctttacacaaggccagaaaaggggt 348
||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 590 ttgactccaacaccagctactcatcctggaacccttacacaaggccagaaacggggt 646
>gnl|LJGI|TC73109 similar to UniRef100_A7PZC7 Cluster: Chromosome chr15 scaffold_40,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr15 scaffold_40, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 756
Score = 392 bits (198), Expect = e-108
Identities = 297/330 (90%)
Strand = Plus / Plus
Query: 673 ggattaaatatttcccttgcaagtcctgatggtcgtgtcatcggcggaggagttggtgga 732
||||||| | |||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 ggattaagtgtttcccttgcaagtcctgatggtcgtgtcatcggtggaggagttggtgga 60
Query: 733 gtgcttattgcagcaagtctgattcaggtgatagttgggagcttcatgtggggtggatca 792
|||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||
Sbjct: 61 gtgcttattgtagcaagtctggttcaggtgatagttgggagcttcatttggggtggatca 120
Query: 793 aagacaaagaacaaaaacaaacaagattcagaaaatgcagaagttgctatggagtcagat 852
||||| |||||||| || || ||||||||||| |||||||||| ||||||||||||||
Sbjct: 121 aagacgaagaacaagaaaaatgaagattcagaaggtgcagaagtttctatggagtcagat 180
Query: 853 catcatgcagttcacaatccagttgcagtgaatagcatttcttcaaatcaaaatcttact 912
||||| |||||||| |||||||| ||||||||||||||||| |||| || ||||| |||
Sbjct: 181 catcaggcagttcataatccagtcgcagtgaatagcatttccccaaaccagaatctgact 240
Query: 913 ccaatctcatctctaagttcttggccggcatcgcgtcaattggatatgcgtaattcccat 972
|||||||||||| || ||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 241 gcaatctcatctcccagcccttggcctgcatcgcgtacattggatatgcgtaattcccat 300
Query: 973 attggcattgatttaatgcgtgggtgacaa 1002
|| | ||||||||||||||| |||||||||
Sbjct: 301 atcgacattgatttaatgcgcgggtgacaa 330
>gnl|LJGI|BP048633
Length = 380
Score = 77.8 bits (39), Expect = 1e-13
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 946 cgtcaattggatatgcgtaattcccatattggcattgatttaatgcgtgggtgac 1000
|||| |||||||||||||||||||| ||||||| ||||||||| |||||||||||
Sbjct: 380 cgtccattggatatgcgtaattcccctattggccttgatttaaagcgtgggtgac 326