Miyakogusa Predicted Gene

Lj0g3v0302779.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0302779.1 Non Chatacterized Hit- tr|C6T1J4|C6T1J4_SOYBN
Putative uncharacterized protein OS=Glycine max PE=4
S,77.22,4e-18,seg,NULL; coiled-coil,NULL,CUFF.20354.1
         (246 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC73320 similar to UniRef100_A7PZC8 Cluster: Chromosome...   250   3e-66

>gnl|LJGI|TC73320 similar to UniRef100_A7PZC8 Cluster: Chromosome chr15 scaffold_40,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr15 scaffold_40, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (95%)
          Length = 489

 Score =  250 bits (126), Expect = 3e-66
 Identities = 126/126 (100%)
 Strand = Plus / Plus

                                                                       
Query: 121 ttggatggtaaagacaagaagaagggtggaagtggatttcaggtggggaagagaaaagtg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 ttggatggtaaagacaagaagaagggtggaagtggatttcaggtggggaagagaaaagtg 190

                                                                       
Query: 181 aagaccaagttgacagctctggctaaagctaaagctgctcaggctatggagctcgacgcg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 aagaccaagttgacagctctggctaaagctaaagctgctcaggctatggagctcgacgcg 250

                 
Query: 241 tgaggc 246
           ||||||
Sbjct: 251 tgaggc 256



 Score = 54.0 bits (27), Expect = 4e-07
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                     
Query: 1  atgtcgaagaagaacaatctcgcaaag 27
          |||||||||||||||||||||||||||
Sbjct: 11 atgtcgaagaagaacaatctcgcaaag 37