Miyakogusa Predicted Gene

Lj0g3v0302199.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0302199.1 Non Chatacterized Hit- tr|B9S3J6|B9S3J6_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,31.87,2.4,seg,NULL,CUFF.20312.1
         (391 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC79965 similar to UniRef100_Q6K7P2 Cluster: Transcript...    60   1e-08

>gnl|LJGI|TC79965 similar to UniRef100_Q6K7P2 Cluster: Transcription factor
           PCF3-like; n=1; Oryza sativa Japonica Group|Rep:
           Transcription factor PCF3-like - Oryza sativa subsp.
           japonica (Rice), partial (49%)
          Length = 771

 Score = 60.0 bits (30), Expect = 1e-08
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                             
Query: 6   tggctcctccgtcaggctaagccatccatcatcgccgttaccggcaccgg 55
           |||||||||||||| ||| |||| |||||||||||||  |||||||||||
Sbjct: 447 tggctcctccgtcaagctgagccctccatcatcgccgccaccggcaccgg 496