Miyakogusa Predicted Gene
- Lj0g3v0302029.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0302029.1 Non Chatacterized Hit- tr|B8AEB3|B8AEB3_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,48.24,0.000000000000006,no description,NULL; no
description,Galactose oxidase, beta-propeller; A Receptor for
Ubiquitination,CUFF.20298.1
(1346 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63341 similar to UniRef100_A7NV34 Cluster: Chromosome... 1324 0.0
gnl|LJGI|TC61484 similar to UniRef100_A7NV34 Cluster: Chromosome... 924 0.0
gnl|LJGI|FS357537 weakly similar to UniRef100_A7Q6X7 Cluster: Ch... 68 2e-10
>gnl|LJGI|TC63341 similar to UniRef100_A7NV34 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (41%)
Length = 753
Score = 1324 bits (668), Expect = 0.0
Identities = 668/668 (100%)
Strand = Plus / Plus
Query: 1 atgggttcgtttttcagtgtgccaaataccaaatctgatacaggtgacagggaaggagtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86 atgggttcgtttttcagtgtgccaaataccaaatctgatacaggtgacagggaaggagtc 145
Query: 61 tctccaaatgaggcatgtaagaggcaaagaatgtcacctacactttatgaagagagtcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 tctccaaatgaggcatgtaagaggcaaagaatgtcacctacactttatgaagagagtcca 205
Query: 121 agactaattcccaatctccctgatgagttatcactgcaaattattgctagacttcctagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 agactaattcccaatctccctgatgagttatcactgcaaattattgctagacttcctagg 265
Query: 181 atttgttacttgaatgtaaaactggtttcagataagtggaagtcaactatcacgagttcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 atttgttacttgaatgtaaaactggtttcagataagtggaagtcaactatcacgagttcg 325
Query: 241 gaactatataaagtaaggaaagaactcgggacaaccgaagagtggctatatctgttggtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 gaactatataaagtaaggaaagaactcgggacaaccgaagagtggctatatctgttggtt 385
Query: 301 aaggttggagaaaacaaactaatgtggcatggtttagatcctcgttctcagatatggcag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 aaggttggagaaaacaaactaatgtggcatggtttagatcctcgttctcagatatggcag 445
Query: 361 agactgcccaatatgccgcatgttgttgacgaagaagaaactagaaagggttcttctagg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 agactgcccaatatgccgcatgttgttgacgaagaagaaactagaaagggttcttctagg 505
Query: 421 ctctggatgtggaacatggtggaaggtatcagaattgctgaagttattagaggttttctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 ctctggatgtggaacatggtggaaggtatcagaattgctgaagttattagaggttttctt 565
Query: 481 ggacagaaggatggatttgatgaaatgcccttttgtggttgttcaattggagctgtaggt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 ggacagaaggatggatttgatgaaatgcccttttgtggttgttcaattggagctgtaggt 625
Query: 541 ggatgtttgtatgttctaggtggattctctaaagcttcaactatgagatgtgtctggtgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 ggatgtttgtatgttctaggtggattctctaaagcttcaactatgagatgtgtctggtgt 685
Query: 601 tttgatccaatgcaaaatgcatggagaaaagtggcttctatgtctacagggagggcatat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 tttgatccaatgcaaaatgcatggagaaaagtggcttctatgtctacagggagggcatat 745
Query: 661 tgtaagac 668
||||||||
Sbjct: 746 tgtaagac 753
>gnl|LJGI|TC61484 similar to UniRef100_A7NV34 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (35%)
Length = 928
Score = 924 bits (466), Expect = 0.0
Identities = 513/534 (96%), Gaps = 21/534 (3%)
Strand = Plus / Plus
Query: 834 taccggtttgacctcatatatgggaaggttgtgtgttccacagagtttgtattcatggcc 893
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21 taccggtttgacctcatatatgggaaggttgtgtgttccacagagtttgtattcatggcc 80
Query: 894 cttttttgttgatgttgggggtgaaatctatgatcctgaaacaaactcatgggtagaaat 953
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 cttttttgttgatgttgggggtgaaatctatgatcctgaaacaaactcatgggtagaaat 140
Query: 954 gccaaatggaatgggagagggttggcctgcaaggcaagcaggtacaaaattgagtgttgt 1013
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 gccaaatggaatgggagagggttggcctgcaaggcaagcaggtacaaaattgagtgttgt 200
Query: 1014 ggtggatggtgaactctatgcttttgatccttctaactcaatggatagtggaaagatcaa 1073
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggtggatggtgaactctatgcttttgatccttctaactcaatggatagtggaaagatcaa 260
Query: 1074 ggtgtat---------------------aaagtagttattgggaaagttcccatatatga 1112
||||||| ||||||||||||||||||||||||||||||||
Sbjct: 261 ggtgtatgatcaaggagaagatgcttggaaagtagttattgggaaagttcccatatatga 320
Query: 1113 ttctgttgactcagagtctccctatctacttgctggtttccatgggaagctacatgtcat 1172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttctgttgactcagagtctccctatctacttgctggtttccatgggaagctacatgtcat 380
Query: 1173 cacaaaagatgccaatcattatattactgttatgcaggctgatttggattcttcaccctc 1232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cacaaaagatgccaatcattatattactgttatgcaggctgatttggattcttcaccctc 440
Query: 1233 aactctctcaaaaagttccactgctgaatcagatgcaattgtttggaagatagttgctac 1292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aactctctcaaaaagttccactgctgaatcagatgcaattgtttggaagatagttgctac 500
Query: 1293 taggggtttgggggaagctgaactagttagttgccaagttgttgatatctagct 1346
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taggggtttgggggaagctgaactagttagttgccaagttgttgatatctagct 554
>gnl|LJGI|FS357537 weakly similar to UniRef100_A7Q6X7 Cluster: Chromosome chr12
scaffold_57, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_57, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (37%)
Length = 570
Score = 67.9 bits (34), Expect = 2e-10
Identities = 133/166 (80%)
Strand = Plus / Minus
Query: 847 tcatatatgggaaggttgtgtgttccacagagtttgtattcatggcccttttttgttgat 906
||||||| ||||||||| | ||| || || || |||||| ||||| ||||||||||||
Sbjct: 532 tcatataggggaaggttatttgtccctcaaagcctgtattgctggccattttttgttgat 473
Query: 907 gttgggggtgaaatctatgatcctgaaacaaactcatgggtagaaatgccaaatggaatg 966
| ||| || ||| | |||||||| | || |||||| | |||||||||| ||| |||
Sbjct: 472 gctggtggagaagtttatgatccaaatgtgaattcatggcttgaaatgccaattggcatg 413
Query: 967 ggagagggttggcctgcaaggcaagcaggtacaaaattgagtgttg 1012
| || |||||||||||||||||||| || ||||||||| ||||||
Sbjct: 412 agtgaaggttggcctgcaaggcaagctggaacaaaattgtgtgttg 367