Miyakogusa Predicted Gene
- Lj0g3v0301709.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0301709.1 tr|K0BV36|K0BV36_LOTJA SIE3 OS=Lotus japonicus
GN=SIE3 PE=2 SV=1,98.45,0,ZF_RING_2,Zinc finger, RING-type; CTLH,CTLH,
C-terminal LisH motif; seg,NULL; C-terminal to LisH mot,CUFF.20270.1
(1145 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62339 similar to UniRef100_A7QSA7 Cluster: Chromosome... 1334 0.0
gnl|LJGI|TC70740 weakly similar to UniRef100_A7QSA7 Cluster: Chr... 1314 0.0
gnl|LJGI|BP039257 similar to UniRef100_Q9ZQ45 Cluster: Expressed... 468 e-131
gnl|LJGI|TC58035 similar to UniRef100_A7QSA7 Cluster: Chromosome... 52 8e-06
>gnl|LJGI|TC62339 similar to UniRef100_A7QSA7 Cluster: Chromosome chr3 scaffold_157,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_157, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (41%)
Length = 964
Score = 1334 bits (673), Expect = 0.0
Identities = 680/681 (99%), Gaps = 1/681 (0%)
Strand = Plus / Plus
Query: 1 atggagcttagtactattaaagatgcttttgaccgtgttactaagaagcaaaagtcatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 atggagcttagtactattaaagatgcttttgaccgtgttactaagaagcaaaagtcatct 335
Query: 61 agctccaagactcaagaagtgattgatcagatcagacaggaaattgagaatgttttagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 agctccaagactcaagaagtgattgatcagatcagacaggaaattgagaatgttttagat 395
Query: 121 acgatgcagtcagtcaataacaccgaccatgtgcttgatcataaaactgtcctgaatgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 acgatgcagtcagtcaataacaccgaccatgtgcttgatcataaaactgtcctgaatgag 455
Query: 181 ctcaaggctagtttacttcaaaccgctccacttagccaaatggaaggtacacagaaggag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 ctcaaggctagtttacttcaaaccgctccacttagccaaatggaaggtacacagaaggag 515
Query: 241 ctaaatgtagcactcagcaagtatgggaagcttcttgagaaaaatttcaacactgatata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 ctaaatgtagcactcagcaagtatgggaagcttcttgagaaaaatttcaacactgatata 575
Query: 301 tccaaggcttacagaaatattgacattgatgtacatactttgaaccaaataattgccaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 tccaaggcttacagaaatattgacattgatgtacatactttgaaccaaataattgccaac 635
Query: 361 catttttatcggcagggcctttttgaaataggggaccattttctaagtgtggttggagag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 catttttatcggcagggcctttttgaaataggggaccattttctaagtgtggttggagag 695
Query: 421 cctgaatctgctgctgttatgaaatccccattcctggaaatgtatcaaatactcgaagcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 cctgaatctgctgctgttatgaaatccccattcctggaaatgtatcaaatactcgaagcc 755
Query: 481 atgaagaatcaggacctggagccagccctcaagtgggctaccagtaattctgacaaactt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 atgaagaatcaggacctggagccagccctcaagtgggctaccagtaattctgacaaactt 815
Query: 541 gctcaaagtggatctgacattgtgctgaagcttcactcaatgcaatttgtaaaaatactt 600
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 816 gctcaaagtggatctgacattgtgctgaagcttcactcaatgcaatttgt-aaaatactt 874
Query: 601 caaaatggaagtagagacgaagcccttcattatgctagaacttacctttctccttttgct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 875 caaaatggaagtagagacgaagcccttcattatgctagaacttacctttctccttttgct 934
Query: 661 tccagtcacatcgctgatatc 681
|||||||||||||||||||||
Sbjct: 935 tccagtcacatcgctgatatc 955
>gnl|LJGI|TC70740 weakly similar to UniRef100_A7QSA7 Cluster: Chromosome chr3
scaffold_157, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr3 scaffold_157, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (59%)
Length = 904
Score = 1314 bits (663), Expect = 0.0
Identities = 720/742 (97%), Gaps = 19/742 (2%)
Strand = Plus / Plus
Query: 422 ctgaatctgctgctgttatgaaatccccattcctggaaatgtatcaaatactcgaagcca 481
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 ctgaatctgctgctgt-atgaaatccccattcctggaaatgtatcaaatactcgaagcca 62
Query: 482 tgaagaatcaggacctggagccagccctcaagtgggctaccagtaattctgacaaacttg 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 tgaagaatcaggacctggagccagccctcaagtgggctaccagtaattctgacaaacttg 122
Query: 542 ctcaaagtggatctgacattgtgctgaagcttcactcaatgcaatttgtaaaaatacttc 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 ctcaaagtggatctgacattgtgctgaagcttcactcaatgcaatttgtaaaaatacttc 182
Query: 602 aaaatggaagtagagacgaagcccttcattatgctagaacttacctttctccttttgctt 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 aaaatggaagtagagacgaagcccttcattatgctagaacttacctttctccttttgctt 242
Query: 662 ccagtcacatcgctgatatccagaagcttatgggaagtcttctgtggactggaaagcttg 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 ccagtcacatcgctgatatccagaagcttatgggaagtcttctgtggactggaaagcttg 302
Query: 722 atagctctccttaccatgcattattatccccatcaaactgggataggttggctgaggaac 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 atagctctccttaccatgcattattatccccatcaaactgggataggttggctgaggaac 362
Query: 782 ttaaaaggcaattctgcaatcttttgggacagtcatacaacagtccattgagtgtgacta 841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 ttaaaaggcaattctgcaatcttttgggacagtcatacaacagtccattgagtgtgacta 422
Query: 842 tatcagcaggggtccaagctttgccacctcttctcaaatttatgaatgtcatggtaggga 901
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 423 tatcagcaggggtccaagctttgccacctcttctcaaatttatgaatgtcatggtgggga 482
Query: 902 agaagcag------------------cagttaccggtgcctgttgagctggacagcgaac 943
|||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 483 agaagcaggaatggcagactatgaaccagttaccggtgcctgttgagctggacagcgaac 542
Query: 944 tccagttccattccatttttgtttgtcctgtctcaaaggaacaagctactgaggataacc 1003
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 tccagttccattccatttttgtttgtcctgtctcaaaggaacaagctactgaggataacc 602
Query: 1004 ctcctatgttaatgtcctgtggccatgtcctctgtaaacagtctatctcgaagatgtcca 1063
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 603 ctcctatgttaatgtcctgtggccatgtcctctgtaaacagtctatcttgaagatgtcca 662
Query: 1064 agaacggctcgaaattattcaagtgcccatattgtccctttgatgttgatgcagcacttt 1123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 agaacggctcgaaattattcaagtgcccatattgtccctttgatgttgatgcagcacttt 722
Query: 1124 gcaagcaactatatttctgatg 1145
|||||||||||||||| |||||
Sbjct: 723 gcaagcaactatatttttgatg 744
>gnl|LJGI|BP039257 similar to UniRef100_Q9ZQ45 Cluster: Expressed protein; n=1;
Arabidopsis thaliana|Rep: Expressed protein - Arabidopsis
thaliana (Mouse-ear cress), partial (22%)
Length = 488
Score = 468 bits (236), Expect = e-131
Identities = 236/236 (100%)
Strand = Plus / Minus
Query: 910 cagttaccggtgcctgttgagctggacagcgaactccagttccattccatttttgtttgt 969
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 cagttaccggtgcctgttgagctggacagcgaactccagttccattccatttttgtttgt 392
Query: 970 cctgtctcaaaggaacaagctactgaggataaccctcctatgttaatgtcctgtggccat 1029
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 cctgtctcaaaggaacaagctactgaggataaccctcctatgttaatgtcctgtggccat 332
Query: 1030 gtcctctgtaaacagtctatctcgaagatgtccaagaacggctcgaaattattcaagtgc 1089
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 gtcctctgtaaacagtctatctcgaagatgtccaagaacggctcgaaattattcaagtgc 272
Query: 1090 ccatattgtccctttgatgttgatgcagcactttgcaagcaactatatttctgatg 1145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 ccatattgtccctttgatgttgatgcagcactttgcaagcaactatatttctgatg 216
>gnl|LJGI|TC58035 similar to UniRef100_A7QSA7 Cluster: Chromosome chr3 scaffold_157,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_157, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (58%)
Length = 814
Score = 52.0 bits (26), Expect = 8e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 1 atggagcttagtactattaaagatgcttttgaccgtgttactaagaagcaaaag 54
|||||||| |||| || |||||||| ||||||||||| ||||||||||||||
Sbjct: 108 atggagctgagtagcatcaaagatgcatttgaccgtgtggctaagaagcaaaag 161