Miyakogusa Predicted Gene
- Lj0g3v0301359.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0301359.1 Non Chatacterized Hit- tr|B8BBH4|B8BBH4_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,35.09,0.000000008,RNI-like,NULL; F-box-like,NULL; no
description,NULL; seg,NULL; FBOX,F-box domain, cyclin-like;
N7-RE,gene.g23434.t1.1
(930 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC80874 weakly similar to UniRef100_O82023 Cluster: N7 ... 250 1e-65
gnl|LJGI|TC63939 similar to UniRef100_Q2HSK3 Cluster: Cyclin-lik... 52 6e-06
>gnl|LJGI|TC80874 weakly similar to UniRef100_O82023 Cluster: N7 protein; n=1;
Medicago truncatula|Rep: N7 protein - Medicago
truncatula (Barrel medic), partial (34%)
Length = 1017
Score = 250 bits (126), Expect = 1e-65
Identities = 369/450 (82%)
Strand = Plus / Plus
Query: 286 gaagacattagtattgaggatttttgcaccaataaaatcctcaaagacattgctgatagt 345
||||||||||||||||||||||||||||| || |||||||| || ||||||||||||
Sbjct: 384 gaagacattagtattgaggatttttgcactgatgaaatcctccaatccattgctgatagc 443
Query: 346 ggaagtcacctacgacggttgcggcttctgaaatgtgagaaaatgtatgataaaggattg 405
||||||||||||||||| |||||||| |||| || | | || | |||| || ||||
Sbjct: 444 ggaagtcacctacgacgaatgcggcttttgaactgctgggagatttctgatgaacaattg 503
Query: 406 agtgtggttgtgaagaaccttccaatgttggaggagtttgaaatttcatttggtgaccta 465
|||| | ||||||||| |||||| ||||||||||||||||||||||||| | ||||
Sbjct: 504 agtgagactgtgaagaagcttccactgttggaggagtttgaaatttcattcagcccccta 563
Query: 466 tctacgtataatttggaagttttgggcaaatgctgcccatatttggaagtgctgaaattt 525
|||| | | | ||||||| | |||||||||| |||||| ||||| ||||||||||||||
Sbjct: 564 tctaaggacactttggaactcatgggcaaatgttgcccacatttgaaagtgctgaaattt 623
Query: 526 aacaagaaggaaaataaagaataccagtgtgatgatgaggcatttgctattgcgaagact 585
|||| || || | |||| | | |||||||||||||||||||||||||| || ||
Sbjct: 624 aacatgaggggactgaaaggctttgaatgtgatgatgaggcatttgctattgcaaaaacc 683
Query: 586 atgcctcggctacgccatctccagcttctgggaaacaggctcactaaccaaggcttgctt 645
||||||| ||| | ||||| |||||| ||||||||||||||||||| | |||||| ||
Sbjct: 684 atgcctcagctgtgtcatcttcagcttttgggaaacaggctcactaataacggcttgatt 743
Query: 646 gccattcttgatggatgcccttgtctagaatctcttgatttgcgtgtttgttccaatgtt 705
|| ||||||||||| |||||| ||| ||||||||||| |||||| |||||| ||||||
Sbjct: 744 gctattcttgatgggtgccctcatcttgaatctcttgacctgcgtgcttgttctaatgtt 803
Query: 706 gatttaagcggaagtttgagggaaaggtgt 735
| | | || ||||| |||| ||||||||||
Sbjct: 804 gttctgagtggaagattgaaggaaaggtgt 833
>gnl|LJGI|TC63939 similar to UniRef100_Q2HSK3 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (37%)
Length = 840
Score = 52.0 bits (26), Expect = 6e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 614 tgggaaacaggctcactaaccaaggcttgcttgccattcttgatggatgcccttgtctag 673
|||||||||| |||| ||| | ||||||||||| ||||||||||| |||||| ||| |
Sbjct: 373 tgggaaacagtctcagtaatgatggcttgcttgctattcttgatggttgccctcttctcg 432
Query: 674 aatctcttga 683
||| ||||||
Sbjct: 433 aatatcttga 442