Miyakogusa Predicted Gene
- Lj0g3v0301139.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0301139.1 Non Chatacterized Hit- tr|I1KA62|I1KA62_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,80.12,0,PPR:
pentatricopeptide repeat domain,Pentatricopeptide repeat; SUBFAMILY
NOT NAMED,NULL; FAMILY NOT ,CUFF.20241.1
(2071 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS338724 weakly similar to UniRef100_A7NV79 Cluster: Ch... 1086 0.0
gnl|LJGI|TC62678 103 4e-21
>gnl|LJGI|FS338724 weakly similar to UniRef100_A7NV79 Cluster: Chromosome chr18
scaffold_1, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_1, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (17%)
Length = 793
Score = 1086 bits (548), Expect = 0.0
Identities = 548/548 (100%)
Strand = Plus / Plus
Query: 1 atggatttgaatcatatccagtttgctttacgctattgcagacgctttagagctatcaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 atggatttgaatcatatccagtttgctttacgctattgcagacgctttagagctatcaaa 305
Query: 61 catgccaaatcactccattcgtatatgataaaatctggacttttcaaccatgtttttctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 catgccaaatcactccattcgtatatgataaaatctggacttttcaaccatgtttttctc 365
Query: 121 ctaaacaacatgatctctgtctatgcaaagtgttcaagtttccatgatgcacgagccctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 ctaaacaacatgatctctgtctatgcaaagtgttcaagtttccatgatgcacgagccctg 425
Query: 181 ttcgacgaaatgcctcacaggaacattgtttcttggacaacaatggtctctacactcacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 ttcgacgaaatgcctcacaggaacattgtttcttggacaacaatggtctctacactcacc 485
Query: 241 aattctgggaagccccatgaggctcttacactctacaacgagatgctggaatccagaact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 aattctgggaagccccatgaggctcttacactctacaacgagatgctggaatccagaact 545
Query: 301 gagcatcccaatcaattcttgtactctgcggttctcaaggcgtgtggtatcgtgggagat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 gagcatcccaatcaattcttgtactctgcggttctcaaggcgtgtggtatcgtgggagat 605
Query: 361 gttgaattgggcaagttggttcacctccatatatctgaagataagctagagtttgacact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 gttgaattgggcaagttggttcacctccatatatctgaagataagctagagtttgacact 665
Query: 421 gttttgatgaatgccctgttggacatgtacatcaaatgtgggagcttgagtgatgccgaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 gttttgatgaatgccctgttggacatgtacatcaaatgtgggagcttgagtgatgccgaa 725
Query: 481 cgagttttctatgaaatcccgcgtaaaaattccacctcatggaacaccctcattctgggg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 cgagttttctatgaaatcccgcgtaaaaattccacctcatggaacaccctcattctgggg 785
Query: 541 catgccaa 548
||||||||
Sbjct: 786 catgccaa 793
>gnl|LJGI|TC62678
Length = 786
Score = 103 bits (52), Expect = 4e-21
Identities = 55/56 (98%)
Strand = Plus / Plus
Query: 2016 caaaagagtaggcataaaacgagctggaaaaagctggattgagatctctagttgag 2071
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1 caaaagagtaggcataaaacaagctggaaaaagctggattgagatctctagttgag 56