Miyakogusa Predicted Gene

Lj0g3v0301119.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0301119.1 Non Chatacterized Hit- tr|I1L010|I1L010_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=3,86.57,0,SUGAR_TRANSPORT_1,Sugar transporter, conserved site;
SUGAR_TRANSPORT_2,Sugar transporter, conserved ,CUFF.20240.1
         (1470 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV418772 weakly similar to UniRef100_A7R1W8 Cluster: Ch...   151   1e-35

>gnl|LJGI|AV418772 weakly similar to UniRef100_A7R1W8 Cluster: Chromosome undetermined
            scaffold_383, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome undetermined scaffold_383, whole
            genome shotgun sequence - Vitis vinifera (Grape), partial
            (3%)
          Length = 218

 Score =  151 bits (76), Expect = 1e-35
 Identities = 160/188 (85%)
 Strand = Plus / Plus

                                                                        
Query: 1093 gcagctcaccattctcctgccattagtaacaaggatagccttagctttggggcaaactct 1152
            ||||||||||||||||||||  ||| |||| | || | ||| |  ||||| |  ||||||
Sbjct: 6    gcagctcaccattctcctgcagttaataaccaagacaccctcatttttggtgggaactct 65

                                                                        
Query: 1153 acatgccatgattacacaaaggccccagatttctcctcatggaactgtatgcattgtttg 1212
            |||||||| | |||||||||||||||| ||||||| || |||| ||||||||| ||||||
Sbjct: 66   acatgccaggcttacacaaaggccccaaatttctcttcgtggagctgtatgcagtgtttg 125

                                                                        
Query: 1213 caagtagattgtgccttttgtgccagaagcgagagtgaatttcttccaggagcatgcttg 1272
            |||| |||||||||||| |||||||   || |||||||||||||||| ||||||||||||
Sbjct: 126  caagcagattgtgccttctgtgccaacggcaagagtgaatttcttccgggagcatgcttg 185

                    
Query: 1273 gcagcaga 1280
            || |||||
Sbjct: 186  gctgcaga 193