Miyakogusa Predicted Gene
- Lj0g3v0300999.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0300999.2 Non Chatacterized Hit- tr|I1M0A4|I1M0A4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.4450
PE=,82.32,0,EPT/RTPC-like,RNA 3'-terminal phosphate
cyclase/enolpyruvate transferase, alpha/beta; RTC,RNA
3'-ter,CUFF.20233.2
(1140 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68425 similar to UniRef100_Q683I1 Cluster: RNA 3'-ter... 517 e-146
gnl|LJGI|BP036198 similar to UniRef100_A7PMM7 Cluster: Chromosom... 258 7e-68
gnl|LJGI|TC74550 similar to UniRef100_A7PMM7 Cluster: Chromosome... 188 5e-47
gnl|LJGI|TC71952 similar to UniRef100_Q85T13 Cluster: Cytochrome... 82 9e-15
>gnl|LJGI|TC68425 similar to UniRef100_Q683I1 Cluster: RNA 3'-terminal phosphate
cyclase-like protein; n=1; Arabidopsis thaliana|Rep: RNA
3'-terminal phosphate cyclase-like protein - Arabidopsis
thaliana (Mouse-ear cress), partial (52%)
Length = 757
Score = 517 bits (261), Expect = e-146
Identities = 537/629 (85%)
Strand = Plus / Plus
Query: 1 atggggaagacttcttacaagaggctgaagggaagccaaagctttaggcagcggttgctt 60
|||||||||| ||||||||||| ||||||||||||| ||||| |||| |||||||||
Sbjct: 129 atggggaagatggcttacaagaggttgaagggaagccagagcttccggcaacggttgctt 188
Query: 61 cttgccactctctcctccactcctattcttattgaggacatacgtgccgacgagacttgg 120
|| |||||||| ||||||||||| ||||| |||||||||||||| || || ||||| |||
Sbjct: 189 ctcgccactctttcctccactcccattctcattgaggacatacgcgctgatgagacgtgg 248
Query: 121 cctggtctacgcagccatgagattttgctgctccgattgtttgataccatctgcgatgat 180
|||||||| | |||||| ||||||| ||| ||||| |||||||| | | |||||||||
Sbjct: 249 cctggtcttcacagccacgagatttcgctcctccggttgtttgagatggtttgcgatgat 308
Query: 181 tgccttgtggaaatcaacgaaacaggtaccaaattgaagtacaagccgggaactattatg 240
|| | ||| |||||||| ||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 309 tgtcatgttgaaatcaatgaaactggtactaaattgaagtacaagccgggaactattatg 368
Query: 241 ggtggaagacaacatcgtgcatacgactgtggtgtgtctcgatccattggttatttcttg 300
||||| | |||| ||| ||| |||| |||||| | || ||||||||||||||||| |
Sbjct: 369 ggtggcaaacaatatcatgcccacgagtgtggtctctcaagatccattggttatttccta 428
Query: 301 gagccactcattttgctaggcttgtttgccaaggaacccattaccattagactcaaagga 360
|||||||||||| ||||||| || ||||| ||||||||| | ||||| | |||||||||
Sbjct: 429 gagccactcattgtgctaggtttatttgcaaaggaacccctcaccatcaagctcaaagga 488
Query: 361 atcacaaatgattcgagggatccatcagttgacaccttcaagtatgttgtgttgcctata 420
|||||||||||||| | |||||| || ||||| |||||||||| | || || || |||
Sbjct: 489 atcacaaatgattctaaggatccttcggttgataccttcaagtctactgcttttcccata 548
Query: 421 ttaaggcgctttgaagttgcctctgaaggattggatcttaaaatagagagtcgtggatta 480
|||| |||||||| |||| |||| ||||| ||||||||||||||||||||||||||| ||
Sbjct: 549 ttaaagcgctttggagttccctcagaaggcttggatcttaaaatagagagtcgtggagta 608
Query: 481 cctccaagtggtggcggcgaagttattttgtcacttcctgttgttcagagtctaacagct 540
|| |||| |||||| |||||||||| |||||| |||||||||||||||||||| | ||
Sbjct: 609 ccaccaaatggtggtggcgaagttactttgtcgcttcctgttgttcagagtctcatggca 668
Query: 541 gttaattggactgatgagggatttgtcaagaggattagaggaattacattttcagccaga 600
|||||||||| ||||||||| ||||| || | ||||||||||| ||| ||||||| ||||
Sbjct: 669 gttaattggattgatgaggggtttgttaaaaagattagaggaactacgttttcagtcaga 728
Query: 601 gtgtctgctcagtttgaaaacagcatgat 629
|||||| ||||||||||||| ||||||||
Sbjct: 729 gtgtctactcagtttgaaaatagcatgat 757
>gnl|LJGI|BP036198 similar to UniRef100_A7PMM7 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 492
Score = 258 bits (130), Expect = 7e-68
Identities = 268/314 (85%), Gaps = 10/314 (3%)
Strand = Plus / Minus
Query: 810 ttctagccttgctgatgatgagaaaatggatcttatgcccccagaggttattggtgaggg 869
|||||||||||| ||||||| ||||| |||||| ||||||| ||| | |||||| |||
Sbjct: 484 ttctagccttgcagatgatgtgaaaagggatctgatgcccctagaagatattgggaagga 425
Query: 870 gattgctaatgatttactaggggagataactcaaggtggagtggtagattcaacatatca 929
|||||||||| |||||||||||||||| ||||| || |||| |||||||||||| ||||
Sbjct: 424 gattgctaattctttactaggggagatagctcaatgtagagttgtagattcaacacatca 365
Query: 930 gggtttgttatttcttctttgcgctctatgtcctcaagatatttccaaggttcgtgttgg 989
||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||
Sbjct: 364 gggtttgctatttcttctttgtgctctatgtcctcaagatgtttccaaggttcgtgttgg 305
Query: 990 aaaactttcccagcacggggttgaaaccctcagaaacattaaggattttcttgatgtgaa 1049
|||||||||||||||| ||| |||||||| | ||| ||||| || ||||
Sbjct: 304 aaaactttcccagcac-------aaa---gaagaaacataagggactttctcaatttgaa 255
Query: 1050 gtttattctcaaaccagatccaaagacaccatcagtttttctccagtgtattggttatgg 1109
||||||| || ||||||||||||| |||| ||||| |||||| ||||| ||||||||||
Sbjct: 254 gtttattatccaaccagatccaaatacacagtcagtgtttctcaagtgtgttggttatgg 195
Query: 1110 catgaagaaccttt 1123
||||||||||||||
Sbjct: 194 catgaagaaccttt 181
>gnl|LJGI|TC74550 similar to UniRef100_A7PMM7 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 489
Score = 188 bits (95), Expect = 5e-47
Identities = 158/179 (88%)
Strand = Plus / Plus
Query: 945 tctttgcgctctatgtcctcaagatatttccaaggttcgtgttggaaaactttcccagca 1004
|||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1 tctttgtgctctatgtcctcaagatgtttccaaggttcgtgttggaaaactttcccagca 60
Query: 1005 cggggttgaaaccctcagaaacattaaggattttcttgatgtgaagtttattctcaaacc 1064
||| |||| || || |||||||| | ||| ||||| || ||||||||||| || |||
Sbjct: 61 tgggattgagacactgagaaacataagggactttctccatttgaagtttattatcccacc 120
Query: 1065 agatccaaagacaccatcagtttttctccagtgtattggttatggcatgaagaaccttt 1123
|||||| || ||||||||||| |||||| ||||| ||||||||||||||||||||||||
Sbjct: 121 agatcccaatacaccatcagtgtttctcaagtgtgttggttatggcatgaagaaccttt 179
>gnl|LJGI|TC71952 similar to UniRef100_Q85T13 Cluster: Cytochrome b; n=1; Anolis
roquet|Rep: Cytochrome b - Anolis roquet, partial (5%)
Length = 485
Score = 81.8 bits (41), Expect = 9e-15
Identities = 95/113 (84%)
Strand = Plus / Plus
Query: 780 tgctgtttctcatgctagggctgaagatgtttctagccttgctgatgatgagaaaatgga 839
||||| |||||||||||||| ||||||| ||||| |||||| ||||||| ||||| |||
Sbjct: 305 tgctgcttctcatgctagggatgaagatacttctaaccttgcagatgatgtgaaaaggga 364
Query: 840 tcttatgcccccagaggttattggtgaggggattgctaatgatttactagggg 892
||| | | ||| ||| | |||||| ||| ||||||||||| |||||||||||
Sbjct: 365 tctgaagacccaagaagatattgggaaggagattgctaatgctttactagggg 417
Score = 54.0 bits (27), Expect = 2e-06
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 703 caggctggaaactctcctggctatggaatttcactggttgcggagactact 753
|||||||||||||| | ||| |||||||||||||| |||| |||||||||
Sbjct: 245 caggctggaaactcacatggatatggaatttcacttcttgcagagactact 295