Miyakogusa Predicted Gene
- Lj0g3v0300989.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0300989.1 Non Chatacterized Hit- tr|G7IJ15|G7IJ15_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,41.18,0.0002,Peptidase_C48,Peptidase C48,
SUMO/Sentrin/Ubl1,CUFF.20232.1
(354 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP034215 similar to UniRef100_Q39009 Cluster: Meiotic r... 165 2e-40
gnl|LJGI|TC81486 143 8e-34
gnl|LJGI|TC82516 similar to UniRef100_Q8QQ03 Cluster: CMP190.5bL... 98 4e-20
gnl|LJGI|TC69273 60 1e-08
>gnl|LJGI|BP034215 similar to UniRef100_Q39009 Cluster: Meiotic recombination protein
DMC1 homolog; n=1; Arabidopsis thaliana|Rep: Meiotic
recombination protein DMC1 homolog - Arabidopsis
thaliana (Mouse-ear cress), partial (8%)
Length = 502
Score = 165 bits (83), Expect = 2e-40
Identities = 110/119 (92%)
Strand = Plus / Minus
Query: 176 agtgccctcgtcagactaataatgttgattgcggatattatgtgatgaagttcatgaaag 235
||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||
Sbjct: 309 agtgccctcgtcagactaatagtgttgattgcggatattacgtgatgaagttcatgaaag 250
Query: 236 atataatcactcaccgacaacttatgatctcaacgaagtattttgaagattgtcagttc 294
|||| |||||||||| || |||| ||||| | ||||| |||||||||||||||||||||
Sbjct: 249 atatcatcactcacccaccacttgtgatccccacgaaatattttgaagattgtcagttc 191
>gnl|LJGI|TC81486
Length = 601
Score = 143 bits (72), Expect = 8e-34
Identities = 109/120 (90%), Gaps = 1/120 (0%)
Strand = Plus / Plus
Query: 176 agtgccctcgtcagactaataatgttgattgcggatattatgtgatgaagttcatgaaag 235
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 99 agtgccctcgtcagactaatagtgttgattgcggatattatgtgatgaagttcatgaaag 158
Query: 236 atataatcactcaccgacaacttatgatc-tcaacgaagtattttgaagattgtcagttc 294
||| |||||||||| || |||| ||||| | ||| | |||||||||||||||||||||
Sbjct: 159 ataccatcactcacccaccacttgtgatcgcctacgcaatattttgaagattgtcagttc 218
>gnl|LJGI|TC82516 similar to UniRef100_Q8QQ03 Cluster: CMP190.5bL; n=1; Camelpox
virus CMS|Rep: CMP190.5bL - Camelpox virus (strain CMS),
partial (15%)
Length = 1029
Score = 97.6 bits (49), Expect = 4e-20
Identities = 76/85 (89%)
Strand = Plus / Plus
Query: 180 ccctcgtcagactaataatgttgattgcggatattatgtgatgaagttcatgaaagatat 239
|||| |||||||||||| ||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 122 cccttgtcagactaatagtgttgattgtggatattatgtgatgaagttaatgaaagatat 181
Query: 240 aatcactcaccgacaacttatgatc 264
|| ||||||| |||||| |||||
Sbjct: 182 cattactcaccatcaacttgtgatc 206
>gnl|LJGI|TC69273
Length = 1303
Score = 60.0 bits (30), Expect = 1e-08
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 176 agtgccctcgtcagactaataatgttgattgcggatattatgtgatgaagttcatgaaag 235
||||||||||||| ||||||||| | ||||| ||||| ||| | ||||||| ||||| |
Sbjct: 859 agtgccctcgtcaaactaataatatagattgtggatactatatcctgaagtttatgaagg 918
Query: 236 atataatcactcac 249
|||| |||||||||
Sbjct: 919 atattatcactcac 932