Miyakogusa Predicted Gene
- Lj0g3v0300769.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0300769.1 Non Chatacterized Hit- tr|I1LZ38|I1LZ38_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,69.03,0,The
RING-variant domain is a C4HC3 zinc-fing,Zinc finger, RING-CH-type;
ZF_RING_CH,Zinc finger,
RING,NODE_17437_length_1372_cov_13.585277.path1.1
(1170 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO010397 similar to UniRef100_A3UQU1 Cluster: CMP-N-ace... 827 0.0
gnl|LJGI|GO010632 541 e-153
gnl|LJGI|TC64680 similar to UniRef100_A7PT25 Cluster: Chromosome... 88 1e-16
gnl|LJGI|TC81482 homologue to UniRef100_A7PJQ4 Cluster: Chromoso... 62 8e-09
>gnl|LJGI|GO010397 similar to UniRef100_A3UQU1 Cluster: CMP-N-acetylneuraminic acid
synthetase; n=1; Vibrio splendidus 12B01|Rep:
CMP-N-acetylneuraminic acid synthetase - Vibrio
splendidus 12B01, partial (7%)
Length = 744
Score = 827 bits (417), Expect = 0.0
Identities = 468/481 (97%), Gaps = 7/481 (1%)
Strand = Plus / Plus
Query: 1 atggcaactgaaggtgcaaacttttccaaggataataataaccaaggcgctggcaccatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 atggcaactgaaggtgcaaacttttccaaggataataataaccaaggcgctggcaccatt 312
Query: 61 gaagataaagttgatatccaaattcagaaggatctagtgtcacctgaaataactgaggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 gaagataaagttgatatccaaattcagaaggatctagtgtcacctgaaataactgaggaa 372
Query: 121 ctcacaagtggacaatatgagacaaggcctaacattatattggagatacctacaataact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 ctcacaagtggacaatatgagacaaggcctaacattatattggagatacctacaataact 432
Query: 181 caagaggaagcaagagaagattatttgagaatagacatacctccaactccatctccaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 caagaggaagcaagagaagattatttgagaatagacatacctccaactccatctccaaga 492
Query: 241 agagtgatatttcccccttgtctaagtcctggtttttccagagccaatgaatctcctggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 agagtgatatttcccccttgtctaagtcctggtttttccagagccaatgaatctcctggt 552
Query: 301 ccttcctcatcgaaaagtagatcaacaattaaaacctttcttcccaaactcagctttaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 ccttcctcatcgaaaagtagatcaacaattaaaacctttcttcccaaactcagctttaaa 612
Query: 361 tttctcaacacaagttcagatattgaaaaagctgcattcctagcacttgaaggttctgca 420
||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||
Sbjct: 613 tttctcaacacaagttcagatattg-aaaagctgcattcctagcacttgaa-gttctgca 670
Query: 421 ccnnnnnnnccttttctttcaaggacattatctcgtaccaaaactaccacgtcgtcctta 480
|| |||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 671 cc-aaaaaaccttttctttca--gacattatctcgtac--aaactaccacgtcgtcctta 725
Query: 481 c 481
|
Sbjct: 726 c 726
>gnl|LJGI|GO010632
Length = 784
Score = 541 bits (273), Expect = e-153
Identities = 279/281 (99%)
Strand = Plus / Plus
Query: 1 atggcaactgaaggtgcaaacttttccaaggataataataaccaaggcgctggcaccatt 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 atggcaactgaaggtgcatacttttccaaggataataataaccaaggcgctggcaccatt 303
Query: 61 gaagataaagttgatatccaaattcagaaggatctagtgtcacctgaaataactgaggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 gaagataaagttgatatccaaattcagaaggatctagtgtcacctgaaataactgaggaa 363
Query: 121 ctcacaagtggacaatatgagacaaggcctaacattatattggagatacctacaataact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 ctcacaagtggacaatatgagacaaggcctaacattatattggagatacctacaataact 423
Query: 181 caagaggaagcaagagaagattatttgagaatagacatacctccaactccatctccaaga 240
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 caagaggaagcaagagatgattatttgagaatagacatacctccaactccatctccaaga 483
Query: 241 agagtgatatttcccccttgtctaagtcctggtttttccag 281
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 agagtgatatttcccccttgtctaagtcctggtttttccag 524
Score = 472 bits (238), Expect = e-132
Identities = 259/262 (98%), Gaps = 3/262 (1%)
Strand = Plus / Plus
Query: 593 cagttccttcatttacagaagaaggtaataccacacctgtaggcgcaaagtttcgtgtaa 652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 cagttccttcatttacagaagaaggtaataccacacctgtaggcgcaaagtttcgtgtaa 581
Query: 653 ttccgaccacgccacgaatcgatgagaaaattgccacaacaacatctaccaaatctccaa 712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 ttccgaccacgccacgaatcgatgagaaaattgccacaacaacatctaccaaatctccaa 641
Query: 713 ctgatgatgctgttgaaaatgaggatggcggtgaagatattcctgaagaagaagctgttt 772
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 642 ctgatgatgctgttgaaaatgaggatggcggtgaagatattcctgaagaag-agctgttt 700
Query: 773 gtagaatttgtatggttgaactgggagaaggtgctaatacttttaaattggagtgcagct 832
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 701 gtagaatttgtatggttgaactgggagaa-gtgctaatacttttaaattggagtgcagct 759
Query: 833 gcaaaggtgagctttcactggc 854
||||| ||||||||||||||||
Sbjct: 760 gcaaa-gtgagctttcactggc 780
>gnl|LJGI|TC64680 similar to UniRef100_A7PT25 Cluster: Chromosome chr8 scaffold_29,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_29, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (35%)
Length = 1291
Score = 87.7 bits (44), Expect = 1e-16
Identities = 122/148 (82%)
Strand = Plus / Plus
Query: 820 ttggagtgcagctgcaaaggtgagctttcactggcacaccaagaatgtgcagttaaatgg 879
||||| ||||||||||||||||| ||| | ||||| ||| |||||||||| ||||||||
Sbjct: 28 ttggaatgcagctgcaaaggtgaacttgctctggctcacaaagaatgtgctattaaatgg 87
Query: 880 tttaggattaaaggtaacagaacatgtgatgtttgcaagcaagaagttaagaacctaccc 939
||||| | || ||||||| || || |||||||||||| ||||||| | ||||||||
Sbjct: 88 tttagtttgaagggtaacaagacctgcgatgtttgcaagtcagaagttcaaaacctacct 147
Query: 940 gtcactcttttacgagttcaaactgttc 967
|| ||||| ||||| |||||| |||||
Sbjct: 148 gtaactctattacggattcaaagtgttc 175
>gnl|LJGI|TC81482 homologue to UniRef100_A7PJQ4 Cluster: Chromosome chr12 scaffold_18,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_18, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 1429
Score = 61.9 bits (31), Expect = 8e-09
Identities = 79/95 (83%)
Strand = Plus / Minus
Query: 826 tgcagctgcaaaggtgagctttcactggcacaccaagaatgtgcagttaaatggtttagg 885
||||| || |||||||||||| |||| || |||||||| |||||||| || ||||||||
Sbjct: 1302 tgcagttgtaaaggtgagcttgcacttgctcaccaagactgtgcagtaaagtggtttagt 1243
Query: 886 attaaaggtaacagaacatgtgatgtttgcaagca 920
|| ||||| || | || |||||||| ||||||||
Sbjct: 1242 atcaaaggaaataagacctgtgatgtctgcaagca 1208