Miyakogusa Predicted Gene
- Lj0g3v0300749.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0300749.1 Non Chatacterized Hit- tr|I1JPL1|I1JPL1_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,64.75,0,zinc
finger,Zinc finger, C2H2-like; SUBFAMILY NOT NAMED,NULL;
SERINE/THREONINE-PROTEIN KINASE
RIO,NU,NODE_71413_length_2090_cov_27.396172.path1.1
(1470 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV772572 similar to UniRef100_Q10QG1 Cluster: Zinc fing... 710 0.0
gnl|LJGI|TC60668 homologue to UniRef100_A7PUY6 Cluster: Chromoso... 236 3e-61
gnl|LJGI|DC593437 homologue to UniRef100_A7NZH2 Cluster: Chromos... 184 1e-45
gnl|LJGI|TC72355 homologue to UniRef100_A7PS38 Cluster: Chromoso... 159 6e-38
gnl|LJGI|TC78698 homologue to UniRef100_A7PUY6 Cluster: Chromoso... 157 2e-37
gnl|LJGI|BW623067 homologue to UniRef100_A7PUY6 Cluster: Chromos... 115 8e-25
gnl|LJGI|DC594840 homologue to UniRef100_Q2HVE6 Cluster: Zinc fi... 111 1e-23
gnl|LJGI|TC61639 similar to UniRef100_Q2HVE6 Cluster: Zinc finge... 60 4e-08
>gnl|LJGI|AV772572 similar to UniRef100_Q10QG1 Cluster: Zinc finger, C2H2 type family
protein, expressed; n=1; Oryza sativa Japonica
Group|Rep: Zinc finger, C2H2 type family protein,
expressed - Oryza sativa subsp. japonica (Rice), partial
(23%)
Length = 491
Score = 710 bits (358), Expect = 0.0
Identities = 376/382 (98%)
Strand = Plus / Minus
Query: 158 tcattgctctctccccaaagaccctcatggcgacgaaccgcttcgtctgtgaaatatgca 217
|||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||
Sbjct: 491 tcattgctctctcccctaagaccctcatggcgacgaaccgcttcgtctgtgttatatgca 432
Query: 218 acaaaggcttccagagagaccagaatctccagctccacagaagaggccacaacctcccat 277
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 actaaggcttccagagagaccagaatctccagctccacagaagaggccacaacctcccat 372
Query: 278 ggaagctccggcagagatccaacaaggaggttcgtaaaaaggtctacatctgcccggaga 337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 ggaagctccggcagagatccaacaaggaggttcgtaaaaaggtctacatctgcccggaga 312
Query: 338 agacctgcgtccaccacgacgcgtcgcgagcactcggcgacctcaccggcatcaagaagc 397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 agacctgcgtccaccacgacgcgtcgcgagcactcggcgacctcaccggcatcaagaagc 252
Query: 398 acttcagcagaaagcacggtgagaagaagtggaagtgtgagaagtgctccaagaaatacg 457
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 acttcagcagaaagcacggtgagaagaagtggaagtgtgagaagtgctccaagaaatacg 192
Query: 458 cagtccaatcagattggaaagctcacaccaaaacatgcggcaccagggagtacaagtgtg 517
|||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 191 cagtcccatcagattggaaagctcacacccaaacatgcggcaccagggagtacaagtgtg 132
Query: 518 actgtggcaccctcttctccag 539
||||||||||||||||||||||
Sbjct: 131 actgtggcaccctcttctccag 110
>gnl|LJGI|TC60668 homologue to UniRef100_A7PUY6 Cluster: Chromosome chr4 scaffold_32,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_32, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (60%)
Length = 951
Score = 236 bits (119), Expect = 3e-61
Identities = 398/491 (81%)
Strand = Plus / Plus
Query: 104 ccaccaccaagaagaagagaaacctgcccggaacaccagatccagatgccgaggtcattg 163
|||| |||||||| || ||||||| || |||| ||||||||||| || ||||| ||||
Sbjct: 180 ccacaaccaagaaaaaacgaaaccttcctggaatgccagatccagaagcagaggtgattg 239
Query: 164 ctctctccccaaagaccctcatggcgacgaaccgcttcgtctgtgaaatatgcaacaaag 223
|||| || || ||||| || |||||||||||| | ||||| || ||||| ||||||||||
Sbjct: 240 ctctgtcaccgaagactctaatggcgacgaacagattcgtatgcgaaatttgcaacaaag 299
Query: 224 gcttccagagagaccagaatctccagctccacagaagaggccacaacctcccatggaagc 283
| || ||||| ||||||||||| ||||| ||| | ||||| ||||| || ||||||||||
Sbjct: 300 ggtttcagagggaccagaatctgcagcttcaccggagaggtcacaatctgccatggaagc 359
Query: 284 tccggcagagatccaacaaggaggttcgtaaaaaggtctacatctgcccggagaagacct 343
| ||||||| | | ||||||||| | || | ||| || |||||||||| || |
Sbjct: 360 tgaggcagaggacgagcaaggaggtgaggaagagggtgtatgtctgcccggaaccaacgt 419
Query: 344 gcgtccaccacgacgcgtcgcgagcactcggcgacctcaccggcatcaagaagcacttca 403
| |||||||| ||| | || ||||| | || || |||||||| || || |||||||||
Sbjct: 420 gtgtccaccatgacccttctcgagcgttgggtgatctcaccggaattaaaaagcacttct 479
Query: 404 gcagaaagcacggtgagaagaagtggaagtgtgagaagtgctccaagaaatacgcagtcc 463
|||||||||||||||||||||||||||| || ||||| |||||||||||||| ||||| |
Sbjct: 480 gcagaaagcacggtgagaagaagtggaaatgcgagaaatgctccaagaaatatgcagttc 539
Query: 464 aatcagattggaaagctcacaccaaaacatgcggcaccagggagtacaagtgtgactgtg 523
|||| ||||||||||||||| |||| ||||| ||||| ||||| || |||||||| |
Sbjct: 540 aatctgattggaaagctcactccaaggtttgcggtaccagagagtataaatgtgactgcg 599
Query: 524 gcaccctcttctccagaaaggatagcttcataacacatagagctttctgtgatgcgttgg 583
|||| | || || || | |||||||||||| || ||||||||||| || ||||||||||
Sbjct: 600 gcacggtgttttcgaggagggatagcttcattactcatagagctttttgcgatgcgttgg 659
Query: 584 cggaagagagt 594
| || ||||||
Sbjct: 660 cagaggagagt 670
>gnl|LJGI|DC593437 homologue to UniRef100_A7NZH2 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (29%)
Length = 589
Score = 184 bits (93), Expect = 1e-45
Identities = 320/395 (81%), Gaps = 3/395 (0%)
Strand = Plus / Plus
Query: 184 atggcgacgaaccgcttcgtctgtgaaatatgcaacaaaggcttccagagagaccagaat 243
|||||||| ||||||||| |||| ||||| || ||||| || |||||||||||||||||
Sbjct: 137 atggcgactaaccgcttcctctgcgaaatctgtaacaaggggttccagagagaccagaac 196
Query: 244 ctccagctccacagaagaggccacaacctcccatggaagctccggcagagatccaacaag 303
|| ||||| || | |||| |||||||| || |||||||| ||| || |||||||
Sbjct: 197 ctgcagctgcatcggcgaggacacaacctgccttggaagctgaagcaaagggccaacaaa 256
Query: 304 gag---gttcgtaaaaaggtctacatctgcccggagaagacctgcgtccaccacgacgcg 360
|| || | || ||||| ||| | ||||| ||||||| || |||||||||||| |
Sbjct: 257 gatcaagtgaggaagaaggtttacgtgtgcccagagaagagttgtgtccaccacgaccct 316
Query: 361 tcgcgagcactcggcgacctcaccggcatcaagaagcacttcagcagaaagcacggtgag 420
||||||| || ||| | || || |||||||| |||||||||||||| || ||||||
Sbjct: 317 agtagagcacttggagacttgacaggaatcaagaaacacttcagcagaaaacatggtgag 376
Query: 421 aagaagtggaagtgtgagaagtgctccaagaaatacgcagtccaatcagattggaaagct 480
|||||||||||||||||||||||||||||||||||||| || || || |||||||| ||
Sbjct: 377 aagaagtggaagtgtgagaagtgctccaagaaatacgctgttcattccgattggaaggcc 436
Query: 481 cacaccaaaacatgcggcaccagggagtacaagtgtgactgtggcaccctcttctccaga 540
|| |||| | || || || || ||||||||||||||||||||||| || ||||||||
Sbjct: 437 catgccaagatttgtgggactagagagtacaagtgtgactgtggcacacttttctccagg 496
Query: 541 aaggatagcttcataacacatagagctttctgtga 575
||||| ||||||||||| ||||||||||| |||||
Sbjct: 497 aaggacagcttcataactcatagagctttttgtga 531
>gnl|LJGI|TC72355 homologue to UniRef100_A7PS38 Cluster: Chromosome chr14
scaffold_27, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_27, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (35%)
Length = 1231
Score = 159 bits (80), Expect = 6e-38
Identities = 176/208 (84%)
Strand = Plus / Plus
Query: 365 gagcactcggcgacctcaccggcatcaagaagcacttcagcagaaagcacggtgagaaga 424
||||||| ||||||||||| ||||| |||||||||||| ||||||||||||| ||||| |
Sbjct: 695 gagcactgggcgacctcactggcattaagaagcacttctgcagaaagcacggcgagaaaa 754
Query: 425 agtggaagtgtgagaagtgctccaagaaatacgcagtccaatcagattggaaagctcaca 484
| ||||| ||||| |||||||||||||| ||||| || ||||| || |||| ||| |||
Sbjct: 755 aatggaaatgtgacaagtgctccaagaagtacgctgttcaatctgactggagagcacact 814
Query: 485 ccaaaacatgcggcaccagggagtacaagtgtgactgtggcaccctcttctccagaaagg 544
|||||| ||| ||||| | ||| || |||||||||||||| ||| |||| ||||||| |
Sbjct: 815 ccaaaatatgtggcacgaaggaatataagtgtgactgtggaaccatcttttccagaagag 874
Query: 545 atagcttcataacacatagagctttctg 572
|||| ||||| || || |||||||||||
Sbjct: 875 atagtttcatcacccacagagctttctg 902
>gnl|LJGI|TC78698 homologue to UniRef100_A7PUY6 Cluster: Chromosome chr4 scaffold_32,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_32, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (65%)
Length = 781
Score = 157 bits (79), Expect = 2e-37
Identities = 379/479 (79%)
Strand = Plus / Plus
Query: 103 accaccaccaagaagaagagaaacctgcccggaacaccagatccagatgccgaggtcatt 162
|||||| ||||||||||| ||||||| ||||||| |||||||||||||| ||||| |||
Sbjct: 116 accaccgccaagaagaagcgaaacctccccggaatgccagatccagatgcagaggtgatt 175
Query: 163 gctctctccccaaagaccctcatggcgacgaaccgcttcgtctgtgaaatatgcaacaaa 222
||||| || || |||||||| |||||||||||| | || || |||||||||||||||||
Sbjct: 176 gctctgtcaccgaagaccctgatggcgacgaacagatttgtatgtgaaatatgcaacaag 235
Query: 223 ggcttccagagagaccagaatctccagctccacagaagaggccacaacctcccatggaag 282
|| || ||||| || |||||||| |||||||| || | || ||||| || |||||||||
Sbjct: 236 gggtttcagagggatcagaatcttcagctccatcgacgggggcacaatctgccatggaag 295
Query: 283 ctccggcagagatccaacaaggaggttcgtaaaaaggtctacatctgcccggagaagacc 342
|| ||||||| || | ||||||||| | || | ||| || | || || || |||
Sbjct: 296 ctgaggcagaggtcaagcaaggaggtgaggaagagggtgtatgtttgtcctgaaccgacg 355
Query: 343 tgcgtccaccacgacgcgtcgcgagcactcggcgacctcaccggcatcaagaagcacttc 402
|| | || ||||| | || |||| | || || ||||| || || |||||||| |||
Sbjct: 356 tgtgctcatcacgatccttctagagctttgggtgatctcacggggattaagaagcatttc 415
Query: 403 agcagaaagcacggtgagaagaagtggaagtgtgagaagtgctccaagaaatacgcagtc 462
||||||| || || |||||||||||||| ||||| |||||||| |||||||| || ||
Sbjct: 416 tgcagaaaacatggcgagaagaagtggaaatgtgacaagtgctctaagaaatatgcggtt 475
Query: 463 caatcagattggaaagctcacaccaaaacatgcggcaccagggagtacaagtgtgactgt 522
||||| ||||||||||||||| |||| | ||||| ||||| ||||| || || || |||
Sbjct: 476 caatcggattggaaagctcactccaagatttgcggtaccagagagtataaatgcgattgt 535
Query: 523 ggcaccctcttctccagaaaggatagcttcataacacatagagctttctgtgatgcgtt 581
|| || | || || || | |||||||||||| || ||||| || || |||||||||||
Sbjct: 536 ggaactttgttttcaaggagggatagcttcatcacgcatagggcgttttgtgatgcgtt 594
>gnl|LJGI|BW623067 homologue to UniRef100_A7PUY6 Cluster: Chromosome chr4 scaffold_32,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_32, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (37%)
Length = 516
Score = 115 bits (58), Expect = 8e-25
Identities = 157/190 (82%)
Strand = Plus / Plus
Query: 104 ccaccaccaagaagaagagaaacctgcccggaacaccagatccagatgccgaggtcattg 163
|||| |||||||| || ||||||| || |||| ||||||||||| || ||||| ||||
Sbjct: 200 ccacaaccaagaaaaaacgaaaccttcctggaatgccagatccagaagcagaggtgattg 259
Query: 164 ctctctccccaaagaccctcatggcgacgaaccgcttcgtctgtgaaatatgcaacaaag 223
|||| || || ||||| || |||||||||||| | ||||| || ||||| ||||||||||
Sbjct: 260 ctctgtcaccgaagactctaatggcgacgaacagattcgtatgcgaaatttgcaacaaag 319
Query: 224 gcttccagagagaccagaatctccagctccacagaagaggccacaacctcccatggaagc 283
| || ||||| ||||||||||| ||||| ||| | ||||| ||||| || ||||||||||
Sbjct: 320 ggtttcagagggaccagaatctgcagcttcaccggagaggtcacaatctgccatggaagc 379
Query: 284 tccggcagag 293
| |||||||
Sbjct: 380 tgaggcagag 389
>gnl|LJGI|DC594840 homologue to UniRef100_Q2HVE6 Cluster: Zinc finger, C2H2-type; n=1;
Medicago truncatula|Rep: Zinc finger, C2H2-type -
Medicago truncatula (Barrel medic), partial (16%)
Length = 418
Score = 111 bits (56), Expect = 1e-23
Identities = 104/120 (86%)
Strand = Plus / Plus
Query: 405 cagaaagcacggtgagaagaagtggaagtgtgagaagtgctccaagaaatacgcagtcca 464
||||||||| ||||||||||||||||| ||||| |||||||||||||| || ||||| ||
Sbjct: 11 cagaaagcatggtgagaagaagtggaaatgtgaaaagtgctccaagaagtatgcagttca 70
Query: 465 atcagattggaaagctcacaccaaaacatgcggcaccagggagtacaagtgtgactgtgg 524
|||||| |||||||||||| ||||||| || || || || || |||| |||||||||||
Sbjct: 71 atcagactggaaagctcactccaaaacctgtggtacaagagaatacagatgtgactgtgg 130
>gnl|LJGI|TC61639 similar to UniRef100_Q2HVE6 Cluster: Zinc finger, C2H2-type; n=1;
Medicago truncatula|Rep: Zinc finger, C2H2-type -
Medicago truncatula (Barrel medic), partial (17%)
Length = 805
Score = 60.0 bits (30), Expect = 4e-08
Identities = 66/78 (84%)
Strand = Plus / Plus
Query: 205 tgtgaaatatgcaacaaaggcttccagagagaccagaatctccagctccacagaagaggc 264
||||| || ||||||||||| ||||| ||||| |||||||| ||||| || ||||||||
Sbjct: 719 tgtgagatctgcaacaaaggattccaaagagatcagaatcttcagcttcatagaagaggg 778
Query: 265 cacaacctcccatggaag 282
||||| | |||||||||
Sbjct: 779 cacaatttaccatggaag 796