Miyakogusa Predicted Gene
- Lj0g3v0300669.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0300669.1 Non Chatacterized Hit- tr|I3SC00|I3SC00_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,97.93,0,RNase_PH,Exoribonuclease, phosphorolytic domain 1;
Ribosomal protein S5 domain 2-like,Ribosomal prot,CUFF.20212.1
(582 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57236 1122 0.0
gnl|LJGI|TC62846 371 e-102
gnl|LJGI|FS321687 homologue to UniRef100_A7P3V4 Cluster: Chromos... 64 1e-09
gnl|LJGI|FS340202 similar to UniRef100_A2RVK7 Cluster: At4g27490... 64 1e-09
gnl|LJGI|DC594568 similar to UniRef100_Q29CB9 Cluster: GA13801-P... 64 1e-09
>gnl|LJGI|TC57236
Length = 1162
Score = 1122 bits (566), Expect = 0.0
Identities = 578/582 (99%)
Strand = Plus / Plus
Query: 1 atggccggcaaagctggagccaccccggcgacatactcgccgtccccgaccaccgataag 60
||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 72 atggccggcaaagctggagccactccggcgacatactcgccgtctccgaccaccgataag 131
Query: 61 aagaaaacttctctcatcaaggaagattgggtccgacccgatggccgcggcttccaccag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 aagaaaacttctctcatcaaggaagattgggtccgacccgatggccgcggcttccaccag 191
Query: 121 tgcagacctgcctttttcaggactggggctgggaatgctgcatcaggatctgcttatgct 180
|||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||
Sbjct: 192 tgcagacctgcctttttcaggactggtgctgtgaatgctgcatcaggatctgcttatgct 251
Query: 181 gagtttggaaacacaaaagtcattgtatctgtttttgggccgagagaaagcaagaaggcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 gagtttggaaacacaaaagtcattgtatctgtttttgggccgagagaaagcaagaaggcc 311
Query: 241 atgctgtacagtgatgtagggcgtctgaattgcaatgtcagctatacaacgtttgcaact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 atgctgtacagtgatgtagggcgtctgaattgcaatgtcagctatacaacgtttgcaact 371
Query: 301 ccagttcgtggacagggttcagaccacaaagattactctgcgatgcttgataaagctttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 ccagttcgtggacagggttcagaccacaaagattactctgcgatgcttgataaagctttg 431
Query: 361 gggggtgcaataatattggaatctttccccaagacgactgtggatgtttttgcactggtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 gggggtgcaataatattggaatctttccccaagacgactgtggatgtttttgcactggtg 491
Query: 421 ctggaatctggcggaagtgatctcccagttgtcatatcatgtgctagccttgccttggca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 ctggaatctggcggaagtgatctcccagttgtcatatcatgtgctagccttgccttggca 551
Query: 481 gatgctggaataatgatgtatgatcttgtagcctcagtttctgtgtcatgtctcagtaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 gatgctggaataatgatgtatgatcttgtagcctcagtttctgtgtcatgtctcagtaag 611
Query: 541 aaccttgtcattgatcctatttcggaggaggaaaactgccaa 582
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 aaccttgtcattgatcctatttcggaggaggaaaactgccaa 653
>gnl|LJGI|TC62846
Length = 710
Score = 371 bits (187), Expect = e-102
Identities = 199/203 (98%)
Strand = Plus / Plus
Query: 1 atggccggcaaagctggagccaccccggcgacatactcgccgtccccgaccaccgataag 60
||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 58 atggccggcaaagctggagccactccggcgacatactcgccgtctccgaccaccgataag 117
Query: 61 aagaaaacttctctcatcaaggaagattgggtccgacccgatggccgcggcttccaccag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 aagaaaacttctctcatcaaggaagattgggtccgacccgatggccgcggcttccaccag 177
Query: 121 tgcagacctgcctttttcaggactggggctgggaatgctgcatcaggatctgcttatgct 180
|||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||
Sbjct: 178 tgcagacctgcctttttcaggactggtgctgtgaatgctgcatcaggatctgcttatgct 237
Query: 181 gagtttggaaacacaaaagtcat 203
|||||||||||||||||||||||
Sbjct: 238 gagtttggaaacacaaaagtcat 260
Score = 115 bits (58), Expect = 3e-25
Identities = 58/58 (100%)
Strand = Plus / Plus
Query: 525 gtcatgtctcagtaagaaccttgtcattgatcctatttcggaggaggaaaactgccaa 582
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 gtcatgtctcagtaagaaccttgtcattgatcctatttcggaggaggaaaactgccaa 313
>gnl|LJGI|FS321687 homologue to UniRef100_A7P3V4 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 726
Score = 63.9 bits (32), Expect = 1e-09
Identities = 71/82 (86%), Gaps = 4/82 (4%)
Strand = Plus / Plus
Query: 134 ttttcaggactggggctgggaatgctgcatcaggatctgc---ttatgctgagtttggaa 190
||||||| ||||| ||| ||||||||||| ||||||||| ||||||||||||||| |
Sbjct: 156 ttttcagcactggttctgtgaatgctgcat-aggatctgctgcttatgctgagtttggga 214
Query: 191 acacaaaagtcattgtatctgt 212
|||| |||| ||||||||||||
Sbjct: 215 acaccaaagccattgtatctgt 236
>gnl|LJGI|FS340202 similar to UniRef100_A2RVK7 Cluster: At4g27490; n=2; Arabidopsis
thaliana|Rep: At4g27490 - Arabidopsis thaliana, partial
(6%)
Length = 634
Score = 63.9 bits (32), Expect = 1e-09
Identities = 71/82 (86%), Gaps = 4/82 (4%)
Strand = Plus / Plus
Query: 134 ttttcaggactggggctgggaatgctgcatcaggatctgc---ttatgctgagtttggaa 190
||||||| ||||| ||| ||||||||||| ||||||||| ||||||||||||||| |
Sbjct: 345 ttttcagcactggttctgtgaatgctgcat-aggatctgctgcttatgctgagtttggga 403
Query: 191 acacaaaagtcattgtatctgt 212
|||| |||| ||||||||||||
Sbjct: 404 acaccaaagccattgtatctgt 425
>gnl|LJGI|DC594568 similar to UniRef100_Q29CB9 Cluster: GA13801-PA; n=1; Drosophila
pseudoobscura|Rep: GA13801-PA - Drosophila pseudoobscura
(Fruit fly), partial (3%)
Length = 485
Score = 63.9 bits (32), Expect = 1e-09
Identities = 71/82 (86%), Gaps = 4/82 (4%)
Strand = Plus / Plus
Query: 134 ttttcaggactggggctgggaatgctgcatcaggatctgc---ttatgctgagtttggaa 190
||||||| ||||| ||| ||||||||||| ||||||||| ||||||||||||||| |
Sbjct: 154 ttttcagcactggttctgtgaatgctgcat-aggatctgctgcttatgctgagtttggga 212
Query: 191 acacaaaagtcattgtatctgt 212
|||| |||| ||||||||||||
Sbjct: 213 acaccaaagccattgtatctgt 234