Miyakogusa Predicted Gene
- Lj0g3v0300449.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0300449.1 Non Chatacterized Hit- tr|I3SUZ9|I3SUZ9_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,100,0,no
description,Homeodomain-like; HTH_MYB,Myb domain;
Homeodomain-like,Homeodomain-like; SANT SWI3, ,CUFF.20188.1
(618 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC80164 homologue to UniRef100_O49021 Cluster: MYB-like... 1209 0.0
gnl|LJGI|BP051779 similar to UniRef100_A9LMX7 Cluster: Myb-like ... 115 3e-25
gnl|LJGI|TC59298 similar to UniRef100_A7P3J8 Cluster: Chromosome... 86 3e-16
gnl|LJGI|TC76156 homologue to UniRef100_Q43525 Cluster: Transcri... 54 1e-06
>gnl|LJGI|TC80164 homologue to UniRef100_O49021 Cluster: MYB-like DNA-binding domain
protein; n=5; Gossypium|Rep: MYB-like DNA-binding domain
protein - Gossypium hirsutum (Upland cotton) (Gossypium
mexicanum), partial (63%)
Length = 983
Score = 1209 bits (610), Expect = 0.0
Identities = 616/618 (99%)
Strand = Plus / Plus
Query: 1 atgagaaaaccttgttgtgacaaacaacaaggccctaacaaaggtgcttggtccaagcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 atgagaaaaccttgttgtgacaaacaacaaggccctaacaaaggtgcttggtccaagcaa 196
Query: 61 gaagatcaaaagcttattgattacatccgtactcatggtgagggttgttggcgttccctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 gaagatcaaaagcttattgattacatccgtactcatggtgagggttgttggcgttccctt 256
Query: 121 gccaaggctgcagggctacaacgttgtggcaaaagctgtagattaaggtggataaactat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 gccaaggctgcagggctacaacgttgtggcaaaagctgtagattaaggtggataaactat 316
Query: 181 ttacgacctgacattaaacatggagactttggtcaagatgaagaagacctcatcatcaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 ttacgacctgacattaaacatggagactttggtcaagatgaagaagacctcatcatcaaa 376
Query: 241 ttccatgccctcctcggcaaccggtggtcactcattgctggaaggttgccgggacgtaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 ttccatgccctcctcggcaaccggtggtcactcattgctggaaggttgccgggacgtaca 436
Query: 301 gacaatgaggtaaagaactattggaattctcacatccgcacaaagctaataaagatgggc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 gacaatgaggtaaagaactattggaattctcacatccgcacaaagctaataaagatgggc 496
Query: 361 atcgatccaaataaccataagctacaacaacaccaacaccaaagcttccctaaagtttca 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 497 atcgatccaaataaccataagctacaacaacaccaacaccaaagcttccctaaactttca 556
Query: 421 tatgcttctgctgcagcaactgcaccatcatcaaatctaattacgatcatgaacaaagag 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tatgcttctgctgcagcaactgcaccatcatcaaatctaattacgatcatgaacaaagac 616
Query: 481 caaggagtccctttcataaaatctaatggctctgtagaggaagcagcatcaatggtttct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 caaggagtccctttcataaaatctaatggctctgtagaggaagcagcatcaatggtttct 676
Query: 541 tcatcatcccaattgaatcttgacctgactattgctttcccttcacctagaaatcctctt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 tcatcatcccaattgaatcttgacctgactattgctttcccttcacctagaaatcctctt 736
Query: 601 gttgaggataaatctaag 618
||||||||||||||||||
Sbjct: 737 gttgaggataaatctaag 754
>gnl|LJGI|BP051779 similar to UniRef100_A9LMX7 Cluster: Myb-like transcription factor
6; n=2; Gossypium|Rep: Myb-like transcription factor 6 -
Gossypium hirsutum (Upland cotton) (Gossypium
mexicanum), partial (21%)
Length = 527
Score = 115 bits (58), Expect = 3e-25
Identities = 82/90 (91%)
Strand = Plus / Minus
Query: 297 tacagacaatgaggtaaagaactattggaattctcacatccgcacaaagctaataaagat 356
||||||||||||||| ||||| |||||||||||||||||||| | ||||||||||||||
Sbjct: 527 tacagacaatgaggtgaagaattattggaattctcacatccgaaggaagctaataaagat 468
Query: 357 gggcatcgatccaaataaccataagctaca 386
||| || |||||||||||||| ||||||||
Sbjct: 467 gggaattgatccaaataaccacaagctaca 438
>gnl|LJGI|TC59298 similar to UniRef100_A7P3J8 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (62%)
Length = 789
Score = 85.7 bits (43), Expect = 3e-16
Identities = 106/127 (83%)
Strand = Plus / Plus
Query: 206 actttggtcaagatgaagaagacctcatcatcaaattccatgccctcctcggcaaccggt 265
|||||| | ||||||||||||| ||||||||||| | ||||| || || || |||||||
Sbjct: 325 actttgctgaagatgaagaagatctcatcatcaagcttcatgctctactaggaaaccggt 384
Query: 266 ggtcactcattgctggaaggttgccgggacgtacagacaatgaggtaaagaactattgga 325
|||| | || || || || ||||| ||||||||||||||||| || |||||||||||||
Sbjct: 385 ggtccttaatagccgggagattgcctggacgtacagacaatgaagtgaagaactattgga 444
Query: 326 attctca 332
| |||||
Sbjct: 445 actctca 451
>gnl|LJGI|TC76156 homologue to UniRef100_Q43525 Cluster: Transcription factor; n=1;
Solanum lycopersicum|Rep: Transcription factor - Solanum
lycopersicum (Tomato) (Lycopersicon esculentum), partial
(61%)
Length = 1383
Score = 54.0 bits (27), Expect = 1e-06
Identities = 72/87 (82%)
Strand = Plus / Plus
Query: 250 ctcctcggcaaccggtggtcactcattgctggaaggttgccgggacgtacagacaatgag 309
||||| |||||| |||||| || || |||||||| ||||| ||| | ||||||||||||
Sbjct: 523 ctccttggcaacaagtggtctctgatagctggaagattgccaggaagaacagacaatgag 582
Query: 310 gtaaagaactattggaattctcacatc 336
||||||| || ||||| ||||||||
Sbjct: 583 ataaagaattactggaacactcacatc 609