Miyakogusa Predicted Gene

Lj0g3v0300169.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0300169.1 CUFF.20949.1
         (325 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC594600 UniRef100_Q5DBE9 Cluster: SJCHGC01974 protein;...   161   3e-39

>gnl|LJGI|DC594600 UniRef100_Q5DBE9 Cluster: SJCHGC01974 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC01974 protein - Schistosoma
           japonicum (Blood fluke), partial (12%)
          Length = 329

 Score =  161 bits (81), Expect = 3e-39
 Identities = 197/236 (83%), Gaps = 11/236 (4%)
 Strand = Plus / Minus

                                                                       
Query: 67  atagattatttaccctgtaacc-ccaagcagaaagcacttagtaggaaatctagaagaca 125
           ||||||||| ||| |||||||  |||||||||||  ||  ||||| |||||||||||| |
Sbjct: 328 atagattatgtacactgtaacaaccaagcagaaatgacagagtagtaaatctagaagaaa 269

                                                                       
Query: 126 aagcagtaagaaaggagaaccaaaggttggaacaaaaagaatttacaacccaatagagtt 185
           || || ||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||
Sbjct: 268 aaacactaagaaaggagaaccaaagattgaaacaaaaagaattcacaacccaatagagtt 209

                                                                       
Query: 186 caacaacttaaacagatggctcactgctatgaagaactttttatttaaacacaacactgc 245
           || |||||||| ||||  |||||||||||||            ||| |||   |||||||
Sbjct: 208 caccaacttaagcagacagctcactgctatg----------ggtttcaacttgacactgc 159

                                                                   
Query: 246 agcagaagaggttaaacaggttcagagttcaatctgtatatcttgtaaaataagtg 301
           |||| ||||||||||||| |||||||||||||| |||| |||||||||||||||||
Sbjct: 158 agcaaaagaggttaaacaagttcagagttcaatttgtacatcttgtaaaataagtg 103