Miyakogusa Predicted Gene
- Lj0g3v0299959.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0299959.2 Non Chatacterized Hit- tr|I1LVC6|I1LVC6_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,93.68,0,WD_REPEATS_1,WD40 repeat, conserved site; SUBFAMILY NOT
NAMED,NULL; WD40 REPEAT PROTEIN,NULL; WD40,W,CUFF.20154.2
(855 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57497 similar to UniRef100_A7P7V0 Cluster: Chromosome... 1130 0.0
gnl|LJGI|TC63922 similar to UniRef100_A7P7V0 Cluster: Chromosome... 519 e-147
gnl|LJGI|FS320033 similar to UniRef100_A7P7V0 Cluster: Chromosom... 172 2e-42
>gnl|LJGI|TC57497 similar to UniRef100_A7P7V0 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (69%)
Length = 1267
Score = 1130 bits (570), Expect = 0.0
Identities = 573/574 (99%)
Strand = Plus / Plus
Query: 1 atgcattgcatctttgatcagtgcagagcctctgttacggtgttaaagtttgggcacatg 60
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 694 atgcattgcatctttgatcaatgcagagcctctgttacggtgttaaagtttgggcacatg 753
Query: 61 agttctgatctacttgcttatggggcatcagatggaaccttgaccgtgtgcagtgtttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 agttctgatctacttgcttatggggcatcagatggaaccttgaccgtgtgcagtgtttct 813
Query: 121 gacgcaccttcagtcatcaaacagttaaacggtcattccaaagatgtcacagattttgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 814 gacgcaccttcagtcatcaaacagttaaacggtcattccaaagatgtcacagattttgat 873
Query: 181 ttttcatcaaacaatcagtacattgcatcgtcttcattggataaaactgtgagagtatgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 874 ttttcatcaaacaatcagtacattgcatcgtcttcattggataaaactgtgagagtatgg 933
Query: 241 gagatatacaaaggcatttgcatacgggtgatatatggagtttcttcacaattatgtatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 934 gagatatacaaaggcatttgcatacgggtgatatatggagtttcttcacaattatgtatc 993
Query: 301 cgttttcaccctgtaaataacaacttcctttcagttggcaatgcaaataaagaaatcaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 994 cgttttcaccctgtaaataacaacttcctttcagttggcaatgcaaataaagaaatcaat 1053
Query: 361 gtgtttaattttagcactggaagggtaattaataagtcagtatttgacagtgaagttacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1054 gtgtttaattttagcactggaagggtaattaataagtcagtatttgacagtgaagttacc 1113
Query: 421 tctatggatcacgatcatacgggtcatctcatattttgtggagatgcacagggatgtata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1114 tctatggatcacgatcatacgggtcatctcatattttgtggagatgcacagggatgtata 1173
Query: 481 tactcagtaaatatgaactctcacaccggtgggttgtcccgctctcatcgatatcgaagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1174 tactcagtaaatatgaactctcacaccggtgggttgtcccgctctcatcgatatcgaagt 1233
Query: 541 agcagcaaacacaaatctccggtcacaacagtgc 574
||||||||||||||||||||||||||||||||||
Sbjct: 1234 agcagcaaacacaaatctccggtcacaacagtgc 1267
>gnl|LJGI|TC63922 similar to UniRef100_A7P7V0 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (25%)
Length = 711
Score = 519 bits (262), Expect = e-147
Identities = 262/262 (100%)
Strand = Plus / Plus
Query: 594 gctagctcgaggacctgtgttgttgacatgtacccaggatggaaatctgtctttcttcag 653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gctagctcgaggacctgtgttgttgacatgtacccaggatggaaatctgtctttcttcag 60
Query: 654 tgtggctttggagattaagggttatttaacacttcggtgctctctcaaattaactccacg 713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgtggctttggagattaagggttatttaacacttcggtgctctctcaaattaactccacg 120
Query: 714 gatacacaaaattcaagcttctttctgtcctcttctttcccttgaaaaaggtgaattcat 773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gatacacaaaattcaagcttctttctgtcctcttctttcccttgaaaaaggtgaattcat 180
Query: 774 agtttctggaagtgaggactcaaatgtttatttctatgatttaacaaagccaaagcatac 833
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agtttctggaagtgaggactcaaatgtttatttctatgatttaacaaagccaaagcatac 240
Query: 834 atgtgtgaacaagctacagggt 855
||||||||||||||||||||||
Sbjct: 241 atgtgtgaacaagctacagggt 262
>gnl|LJGI|FS320033 similar to UniRef100_A7P7V0 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (34%)
Length = 665
Score = 172 bits (87), Expect = 2e-42
Identities = 87/87 (100%)
Strand = Plus / Plus
Query: 1 atgcattgcatctttgatcagtgcagagcctctgttacggtgttaaagtttgggcacatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 atgcattgcatctttgatcagtgcagagcctctgttacggtgttaaagtttgggcacatg 638
Query: 61 agttctgatctacttgcttatggggca 87
|||||||||||||||||||||||||||
Sbjct: 639 agttctgatctacttgcttatggggca 665