Miyakogusa Predicted Gene
- Lj0g3v0299869.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0299869.3 Non Chatacterized Hit- tr|I1M5W4|I1M5W4_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,92.01,0,WD_REPEATS_2,WD40 repeat;
WD_REPEATS_REGION,WD40-repeat-containing domain; LISH,LisH
dimerisation mo,CUFF.20159.3
(1728 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC77986 homologue to UniRef100_A7QQ63 Cluster: Chromoso... 515 e-145
gnl|LJGI|BP073626 homologue to UniRef100_Q9LMQ9 Cluster: F7H2.9 ... 385 e-106
gnl|LJGI|TC82200 homologue to UniRef100_Q2HW32 Cluster: Lissence... 94 3e-18
gnl|LJGI|FS330577 similar to UniRef100_A7PRX2 Cluster: Chromosom... 80 5e-14
gnl|LJGI|TC70086 homologue to UniRef100_Q2HW32 Cluster: Lissence... 72 1e-11
gnl|LJGI|TC66714 similar to UniRef100_A7PRX2 Cluster: Chromosome... 72 1e-11
gnl|LJGI|BP039104 homologue to UniRef100_A7PF76 Cluster: Chromos... 58 2e-07
gnl|LJGI|TC77627 homologue to UniRef100_A7PF76 Cluster: Chromoso... 54 3e-06
>gnl|LJGI|TC77986 homologue to UniRef100_A7QQ63 Cluster: Chromosome undetermined
scaffold_141, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_141,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (15%)
Length = 702
Score = 515 bits (260), Expect = e-145
Identities = 437/496 (88%)
Strand = Plus / Plus
Query: 1 atgtcttcactcagtagggagttggtgttcctgatcctgcaatttctggatgaggaaaag 60
|||||||| ||||||||||| |||||||| ||||| |||| ||||||||||||||||||
Sbjct: 207 atgtcttctctcagtagggaactggtgttcttgatcttgcagtttctggatgaggaaaag 266
Query: 61 ttcaaagagactgttcacaagcttgagcaggagtctggatttttctttaacatgaagtat 120
||||||||||| ||||||||||||||||| |||||||| |||||||| ||||||||||||
Sbjct: 267 ttcaaagagacagttcacaagcttgagcaagagtctgggtttttcttcaacatgaagtat 326
Query: 121 tttgaagacgaagtgcacaatggcaattgggatgaggttcagaggtatctctctggtttc 180
||||| || |||||||| ||||| |||||||| |||||| ||| || |||||||| |||
Sbjct: 327 tttgaggatgaagtgcataatgggaattgggaagaggttgagaaatacctctctggattc 386
Query: 181 acaaaagtagatgataataggtactctatgaagatattttttgagataagaaagcagaaa 240
||||||||||||||||||||||| || |||||||||||||| |||||||| || |||||
Sbjct: 387 acaaaagtagatgataataggtattccatgaagatatttttcgagataaggaaacagaag 446
Query: 241 tacctggaggcattggataagcatgatcggtccaaggcagtagaaatattagcgaaggat 300
|| ||||||||||| || |||||||| ||||||||||| || |||||||||| |||||||
Sbjct: 447 tatctggaggcattagacaagcatgaccggtccaaggctgttgaaatattagtgaaggat 506
Query: 301 ttgaaagtattcgccacatttaatgaggagctgttcaaagaaatcacacagcttttgaca 360
|||||||| || || ||||| ||||| || |||||||| |||||||| ||||| ||||||
Sbjct: 507 ttgaaagtgtttgctacattcaatgaagaactgttcaaggaaatcacccagctcttgaca 566
Query: 361 ttggagaattttagggaaaacgaacaattgtctaagtatggagatacgaaatctgctaga 420
|||||||||||||||||||| |||||||| || |||||||| ||||| || ||||| ||
Sbjct: 567 ttggagaattttagggaaaatgaacaattatcaaagtatggtgatacaaagtctgcacga 626
Query: 421 acaatcatgttggttgagctcaaaaagttgatcgaggcgaatcccttatttcgtgacaaa 480
|||||||||||||||||||||||||| | || || || |||||||| || |||||||||
Sbjct: 627 gcaatcatgttggttgagctcaaaaagctcattgaagcaaatcccttgttccgtgacaaa 686
Query: 481 ttgcagtttcccaacc 496
||||| ||||||||||
Sbjct: 687 ttgcaatttcccaacc 702
>gnl|LJGI|BP073626 homologue to UniRef100_Q9LMQ9 Cluster: F7H2.9 protein; n=1;
Arabidopsis thaliana|Rep: F7H2.9 protein - Arabidopsis
thaliana (Mouse-ear cress), partial (9%)
Length = 310
Score = 385 bits (194), Expect = e-106
Identities = 200/202 (99%)
Strand = Plus / Plus
Query: 1527 cgtttattctgtctgcccgcattataaagaaaacattcagttcatcttttccacggcatt 1586
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgtttattctgtctgcccgcattataaagaaaacattcagttcatcttttccacggcatg 60
Query: 1587 ggatggaaagataaaagcatggttgtatgacaatatgggatctcgtgttgattatgatgc 1646
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggatggaaagataaaagcatggttgtatgacaatatgggatctcgtgttgattatgatgc 120
Query: 1647 acccggccgttggtgttcaactatggcctatagtgctgatggttcaaggctcttttcatg 1706
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acccggccgtgggtgttcaactatggcctatagtgctgatggttcaaggctcttttcatg 180
Query: 1707 tggaactagcaaggatggggaa 1728
||||||||||||||||||||||
Sbjct: 181 tggaactagcaaggatggggaa 202
>gnl|LJGI|TC82200 homologue to UniRef100_Q2HW32 Cluster: Lissencephaly type-1-like
homology motif; CTLH, C-terminal to LisH motif; Nitrous
oxide reductase, N-terminal; WD40-like; Quinonprotein
alcohol dehydrogenase-like; n=1; Medicago
truncatula|Rep: Lissencephaly type-1-like homology
motif; CTLH, C-terminal to LisH motif; Nitrous oxide
reductase, N-terminal; WD40-like; Quinonprotein alcohol
dehydrogenase-like - Medicago truncatula (Barrel medic),
partial (24%)
Length = 952
Score = 93.7 bits (47), Expect = 3e-18
Identities = 182/227 (80%)
Strand = Plus / Plus
Query: 22 ttggtgttcctgatcctgcaatttctggatgaggaaaagttcaaagagactgttcacaag 81
|||||||| || || || || |||||||||||||| || ||||||||| |||| ||||||
Sbjct: 150 ttggtgtttctcatactccagtttctggatgaggagaacttcaaagagtctgtgcacaag 209
Query: 82 cttgagcaggagtctggatttttctttaacatgaagtattttgaagacgaagtgcacaat 141
|||||||| || |||| ||||| || ||||||||||| ||||| || ||||||| |
Sbjct: 210 cttgagcaagaatctgcgttttttttcaacatgaagtactttgaggaaaaagtgcaggct 269
Query: 142 ggcaattgggatgaggttcagaggtatctctctggtttcacaaaagtagatgataatagg 201
||| | ||||| || ||| ||| ||| | || || || || ||||| || ||||||||
Sbjct: 270 ggcgaatgggaagaagttgagaagtacttatcagggtttaccaaagttgacgataataga 329
Query: 202 tactctatgaagatattttttgagataagaaagcagaaatacctgga 248
||||| ||||| ||||| ||||| || || ||||||||||| |||||
Sbjct: 330 tactcaatgaaaatattctttgaaatcaggaagcagaaatatctgga 376
>gnl|LJGI|FS330577 similar to UniRef100_A7PRX2 Cluster: Chromosome chr14 scaffold_27,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_27, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 640
Score = 79.8 bits (40), Expect = 5e-14
Identities = 97/116 (83%)
Strand = Plus / Plus
Query: 13 agtagggagttggtgttcctgatcctgcaatttctggatgaggaaaagttcaaagagact 72
|||||||| |||||| | || || || |||||||| || ||||| |||||||| || |||
Sbjct: 196 agtagggaattggtgcttctcattcttcaatttcttgaggaggagaagttcaaggacact 255
Query: 73 gttcacaagcttgagcaggagtctggatttttctttaacatgaagtattttgaaga 128
|| |||||||||||||| || ||||| || | ||| || |||||||||||||||||
Sbjct: 256 gtacacaagcttgagcatgaatctgggttctacttcaatatgaagtattttgaaga 311
>gnl|LJGI|TC70086 homologue to UniRef100_Q2HW32 Cluster: Lissencephaly type-1-like
homology motif; CTLH, C-terminal to LisH motif; Nitrous
oxide reductase, N-terminal; WD40-like; Quinonprotein
alcohol dehydrogenase-like; n=1; Medicago
truncatula|Rep: Lissencephaly type-1-like homology
motif; CTLH, C-terminal to LisH motif; Nitrous oxide
reductase, N-terminal; WD40-like; Quinonprotein alcohol
dehydrogenase-like - Medicago truncatula (Barrel medic),
partial (11%)
Length = 655
Score = 71.9 bits (36), Expect = 1e-11
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 16 agggagttggtgttcctgatcctgcaatttctggatgaggaaaagttcaaagagactgtt 75
||||| |||||||| || || || || |||||||||||||| |||||||||||| |||||
Sbjct: 273 agggaattggtgtttctcatactccagtttctggatgaggagaagttcaaagagtctgtt 332
Query: 76 cacaagcttgag 87
||||| ||||||
Sbjct: 333 cacaaacttgag 344
>gnl|LJGI|TC66714 similar to UniRef100_A7PRX2 Cluster: Chromosome chr14 scaffold_27,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_27, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (29%)
Length = 1326
Score = 71.9 bits (36), Expect = 1e-11
Identities = 96/116 (82%)
Strand = Plus / Plus
Query: 10 ctcagtagggagttggtgttcctgatcctgcaatttctggatgaggaaaagttcaaagag 69
||||| ||||| ||||||||||| || || |||||||| || || || || ||||| ||
Sbjct: 325 ctcagcagggaattggtgttcctcattcttcaatttctcgaggaagagaaattcaaggaa 384
Query: 70 actgttcacaagcttgagcaggagtctggatttttctttaacatgaagtattttga 125
|||| |||||||| ||||| |||||||| || ||||| || ||||||||||||||
Sbjct: 385 gctgtacacaagctggagcaagagtctggtttcttcttcaatatgaagtattttga 440
>gnl|LJGI|BP039104 homologue to UniRef100_A7PF76 Cluster: Chromosome chr11
scaffold_13, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (14%)
Length = 472
Score = 58.0 bits (29), Expect = 2e-07
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 515 ggactctcatcaatcagagcttgaattggcagcatcaactttgtaagaa 563
||||||| || ||||||||||| || ||||||||||| |||||||||||
Sbjct: 77 ggactctaattaatcagagcttaaactggcagcatcagctttgtaagaa 125
>gnl|LJGI|TC77627 homologue to UniRef100_A7PF76 Cluster: Chromosome chr11
scaffold_13, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (9%)
Length = 535
Score = 54.0 bits (27), Expect = 3e-06
Identities = 93/115 (80%)
Strand = Plus / Plus
Query: 1 atgtcttcactcagtagggagttggtgttcctgatcctgcaatttctggatgaggaaaag 60
|||||||| || || || |||||||| || || || || || ||||| ||||| || ||
Sbjct: 241 atgtcttcgctgagcagagagttggtttttcttatacttcagtttctcgatgaagagaaa 300
Query: 61 ttcaaagagactgttcacaagcttgagcaggagtctggatttttctttaacatga 115
|| || ||| ||||||||||| | |||||||| || || ||||||||||||||||
Sbjct: 301 tttaaggagtctgttcacaagttggagcaggaatcaggttttttctttaacatga 355