Miyakogusa Predicted Gene

Lj0g3v0299249.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0299249.1 Non Chatacterized Hit- tr|D7LZ23|D7LZ23_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,46.55,5e-16,PRONE,Plant specific Rop nucleotide exchanger,
PRONE,NODE_83427_length_1225_cov_15.594286.path2.1
         (434 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC79297 similar to UniRef100_A7PIJ5 Cluster: Chromosome...   813   0.0  

>gnl|LJGI|TC79297 similar to UniRef100_A7PIJ5 Cluster: Chromosome chr13 scaffold_17,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr13 scaffold_17, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (26%)
          Length = 1034

 Score =  813 bits (410), Expect = 0.0
 Identities = 425/430 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcatttaacattgtagctcgtatagatgatttgctatatgtggatgacttgacaaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 atggcatttaacattgtagctcgtatagatgatttgctatatgtggatgacttgacaaaa 424

                                                                       
Query: 61  cattcagataggtttccattggtgccaccgacagttaatgtggtttctcagcagaagctt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 cattcagataggtttccattggtgccaccgacagttaatgtggtttctcagcagaagctt 484

                                                                       
Query: 121 tcgcgttcaatggcagtgtctgtctcaggcactccgcacaaagcattatcacctgtgcct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 tcgcgttcaatggcagtgtctgtctcaggcactccgcacaaagcattatcacctgtgcct 544

                                                                       
Query: 181 ctaattagtccagcaaggggagatagagagagaactcctttcctcaacatcaacaataac 240
           ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 545 ctaattagtccggcaaggggagatagagagagatctcctttcctcaacatcaacaataac 604

                                                                       
Query: 241 aacatcatcaaacctcaacgtcgtggctttggcgtgcgaagagcattgtcaaattatctt 300
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 605 aacatcatcaaacctcaacgtcgtggctttggcgtgcgaagagcgttgtcaaattatctt 664

                                                                       
Query: 301 ggaggagagaccaaagcaacaaagatgtttagcaatgcaactgaagtttatggtacaaac 360
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 665 ggaggagagaccaaagcaacaaagatgtttagcaatgcaactgaagttaatggtacaaac 724

                                                                       
Query: 361 ccaaattgcaataaagcagaacagccagaatgtcagaaggaatcgcatgacatgaggagc 420
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 ccaaattgcaataaaacagaacagccagaatgtcagaaggaatcgcatgacatgaggagc 784

                     
Query: 421 aagacaaaat 430
           ||||||||||
Sbjct: 785 aagacaaaat 794