Miyakogusa Predicted Gene

Lj0g3v0298969.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0298969.1 tr|Q7XM23|Q7XM23_ORYSJ OSJNBa0084K01.8 protein
OS=Oryza sativa subsp. japonica GN=OSJNBa0084K01.8
PE,49.24,7e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
Auxin_inducible,Auxin responsive SAUR
protein,NODE_63616_length_491_cov_23.678207.path2.1
         (402 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC74726 weakly similar to UniRef100_A7P800 Cluster: Chr...   733   0.0  

>gnl|LJGI|TC74726 weakly similar to UniRef100_A7P800 Cluster: Chromosome chr3
           scaffold_8, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr3 scaffold_8, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (75%)
          Length = 672

 Score =  733 bits (370), Expect = 0.0
 Identities = 394/402 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtcgccgtcgacgggaaactgcagcaagatccgccgcattgtgcgcctccggcaaatg 60
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21  atgtcgccgtcaacgggaaactgcagcaagatccgccgcattgtgcgcctccggcaaatg 80

                                                                       
Query: 61  cttctccggtggaggacgaaggcgcagctagcgacgcccgatgtcccggcgggacacgtt 120
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81  cttctccggtggaggacaaaggcgcagctagcgacgcccgatgtcccggcgggacacgtt 140

                                                                       
Query: 121 acggtgtgcgtggggcctagtaagaggaggttcgtggtgcggacgacgtgcctgaatcac 180
           ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 141 acggtgtgcgtggggcctagtaaaaggaggttcgtggtgcggacaacgtgcctgaatcac 200

                                                                       
Query: 181 ccgatcttccagaagcttctggcgcaggcggaggaggagtacgggttctgcaaccacggc 240
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccgatcttccaaaagcttctggcgcaggcggaggaggagtacgggttctgcaaccacggc 260

                                                                       
Query: 241 ccgctcgctatcccctgcgatgagtcgcttttcgaagagcttcttcgggtcatgacccga 300
           |||||||||||||||||| |||||||||||||| || |||||||||||||||||||||||
Sbjct: 261 ccgctcgctatcccctgcaatgagtcgcttttcaaaaagcttcttcgggtcatgacccga 320

                                                                       
Query: 301 cccgaacaccggtttgaagattctcagagacgttgccacgttgatgtcagaagtagtggc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cccgaacaccggtttgaagattctcagagacgttgccacgttgatgtcagaagtagtggc 380

                                                     
Query: 361 ggagaatcgtggccgttgcttaatgacgatccagtgtgctga 402
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggagaatcgtggccgttgcttaatgacgatccagtgtgctga 422