Miyakogusa Predicted Gene
- Lj0g3v0298859.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0298859.1 Non Chatacterized Hit- tr|I1NRF5|I1NRF5_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4
SV=1,42.74,6e-19,seg,NULL; RINGv,Zinc finger, RING-CH-type;
ZF_RING_CH,Zinc finger, RING-CH-type; GB DEF:
HYPOTHETICA,NODE_54933_length_1200_cov_73.122498.path1.1
(666 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS316307 similar to UniRef100_A7PIE0 Cluster: Chromosom... 946 0.0
>gnl|LJGI|FS316307 similar to UniRef100_A7PIE0 Cluster: Chromosome chr13 scaffold_17,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_17, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (39%)
Length = 737
Score = 946 bits (477), Expect = 0.0
Identities = 477/477 (100%)
Strand = Plus / Plus
Query: 1 atgctgctcaatgaggatgaaaagttgcatcatgttgctgttgatatagacaatggcggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgctgctcaatgaggatgaaaagttgcatcatgttgctgttgatatagacaatggcggt 320
Query: 61 ggtcaccggagctctgaagggtgttccggcgaccgggaggaggaggagcgaagggggtgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggtcaccggagctctgaagggtgttccggcgaccgggaggaggaggagcgaagggggtgt 380
Query: 121 tctgatggttctggtgctgagattgtgggagtgtgtgaaaaggagagaggaagaggatcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctgatggttctggtgctgagattgtgggagtgtgtgaaaaggagagaggaagaggatcc 440
Query: 181 tctgcttcagattcagagtgttctgtggaggtggtggatctggaaggtggtggagaggaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctgcttcagattcagagtgttctgtggaggtggtggatctggaaggtggtggagaggaa 500
Query: 241 gtcacagatgggaaggtgcatttggctaaggtggagagggattgcaggatttgccatctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtcacagatgggaaggtgcatttggctaaggtggagagggattgcaggatttgccatctc 560
Query: 301 agcatggatatgagtatgagcaatcaggaatctggtactcccattgagctggggtgttct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agcatggatatgagtatgagcaatcaggaatctggtactcccattgagctggggtgttct 620
Query: 361 tgcaaggatgatttggctgctgctcacaaacagtgtgctgaggcttggttcaagatcaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgcaaggatgatttggctgctgctcacaaacagtgtgctgaggcttggttcaagatcaag 680
Query: 421 ggtaacaaaacttgtgaaatctgtggatcaattgcacacaatgtagctggcgctatt 477
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ggtaacaaaacttgtgaaatctgtggatcaattgcacacaatgtagctggcgctatt 737