Miyakogusa Predicted Gene
- Lj0g3v0298659.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0298659.1 Non Chatacterized Hit- tr|J3M3D2|J3M3D2_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB05G1,79.17,0.0000000000004, ,CUFF.20056.1
(394 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60242 similar to UniRef100_A7NSQ8 Cluster: Chromosome... 660 0.0
gnl|LJGI|GO041478 similar to UniRef100_A7NSQ8 Cluster: Chromosom... 652 0.0
gnl|LJGI|TC66530 similar to UniRef100_A7NSQ8 Cluster: Chromosome... 462 e-130
>gnl|LJGI|TC60242 similar to UniRef100_A7NSQ8 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (76%)
Length = 743
Score = 660 bits (333), Expect = 0.0
Identities = 333/333 (100%)
Strand = Plus / Plus
Query: 1 atggcaggcaaagctgctggttcagcagtaaaggcagttgctgagtatcaatatccttgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 atggcaggcaaagctgctggttcagcagtaaaggcagttgctgagtatcaatatccttgg 153
Query: 61 cgcgagaagttagccaagtataaggatgaattggccaagggtgtgtggggatactgggag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 cgcgagaagttagccaagtataaggatgaattggccaagggtgtgtggggatactgggag 213
Query: 121 ttgggggcatggaagccactcagcatcagtgctcggcgtcgagcccagcttcgaaaggaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 ttgggggcatggaagccactcagcatcagtgctcggcgtcgagcccagcttcgaaaggaa 273
Query: 181 gtccttcttgctggggaggattggccgtatgaccctgaaaggaaggagatgaagaccaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 gtccttcttgctggggaggattggccgtatgaccctgaaaggaaggagatgaagaccaag 333
Query: 241 aggaaagggcataagtgtgataggatagcagctgagaaaagggcaaacactgcgaggtta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 aggaaagggcataagtgtgataggatagcagctgagaaaagggcaaacactgcgaggtta 393
Query: 301 atggagaagatgccggaaatgttgctggagcac 333
|||||||||||||||||||||||||||||||||
Sbjct: 394 atggagaagatgccggaaatgttgctggagcac 426
>gnl|LJGI|GO041478 similar to UniRef100_A7NSQ8 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (76%)
Length = 603
Score = 652 bits (329), Expect = 0.0
Identities = 332/333 (99%)
Strand = Plus / Minus
Query: 1 atggcaggcaaagctgctggttcagcagtaaaggcagttgctgagtatcaatatccttgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 atggcaggcaaagctgctggttcagcagtaaaggcagttgctgagtatcaatatccttgg 455
Query: 61 cgcgagaagttagccaagtataaggatgaattggccaagggtgtgtggggatactgggag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 cgcgagaagttagccaagtataaggatgaattggccaagggtgtgtggggatactgggag 395
Query: 121 ttgggggcatggaagccactcagcatcagtgctcggcgtcgagcccagcttcgaaaggaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 ttgggggcatggaagccactcagcatcagtgctcggcgtcgagcccagcttcgaaaggaa 335
Query: 181 gtccttcttgctggggaggattggccgtatgaccctgaaaggaaggagatgaagaccaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 gtccttcttgctggggaggattggccgtatgaccctgaaaggaaggagatgaagaccaag 275
Query: 241 aggaaagggcataagtgtgataggatagcagctgagaaaagggcaaacactgcgaggtta 300
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 274 aggaaagggcataagtgtgataggatagcagttgagaaaagggcaaacactgcgaggtta 215
Query: 301 atggagaagatgccggaaatgttgctggagcac 333
|||||||||||||||||||||||||||||||||
Sbjct: 214 atggagaagatgccggaaatgttgctggagcac 182
>gnl|LJGI|TC66530 similar to UniRef100_A7NSQ8 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (76%)
Length = 832
Score = 462 bits (233), Expect = e-130
Identities = 305/329 (92%)
Strand = Plus / Plus
Query: 1 atggcaggcaaagctgctggttcagcagtaaaggcagttgctgagtatcaatatccttgg 60
|||||||| ||||||||||||||||| ||||||||| | || ||||| |||||||| |||
Sbjct: 179 atggcaggaaaagctgctggttcagctgtaaaggcaatagcggagtaccaatatccgtgg 238
Query: 61 cgcgagaagttagccaagtataaggatgaattggccaagggtgtgtggggatactgggag 120
|| ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 239 cgtgagaagttagcaaagtataaggatgaactggccaagggtgtgtggggatactgggag 298
Query: 121 ttgggggcatggaagccactcagcatcagtgctcggcgtcgagcccagcttcgaaaggaa 180
|||||||||||||||||||| || |||||||||||||||||||| |||||||||||||
Sbjct: 299 ttgggggcatggaagccactgagtatcagtgctcggcgtcgagctatgcttcgaaaggaa 358
Query: 181 gtccttcttgctggggaggattggccgtatgaccctgaaaggaaggagatgaagaccaag 240
||||||||||| ||||| |||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 359 gtccttcttgccggggaagattggccctatgatcctgaaaggaaggagatgaagaccaag 418
Query: 241 aggaaagggcataagtgtgataggatagcagctgagaaaagggcaaacactgcgaggtta 300
|||||||| || ||||||||||||||||| |||||||||||||||||||| || ||||||
Sbjct: 419 aggaaaggacacaagtgtgataggatagctgctgagaaaagggcaaacaccgcaaggtta 478
Query: 301 atggagaagatgccggaaatgttgctgga 329
|||||||||||||||||||||||||||||
Sbjct: 479 atggagaagatgccggaaatgttgctgga 507