Miyakogusa Predicted Gene
- Lj0g3v0298499.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0298499.1 Non Chatacterized Hit- tr|D8RUV9|D8RUV9_SELML
Putative uncharacterized protein OS=Selaginella
moelle,53.65,4e-17,Pollen_Ole_e_I,Pollen Ole e 1 allergen/extensin;
seg,NULL,CUFF.20066.1
(1452 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC82766 similar to UniRef100_A7P093 Cluster: Chromosome... 410 e-113
gnl|LJGI|AW164126 similar to UniRef100_Q09085 Cluster: Hydroxypr... 125 8e-28
gnl|LJGI|GO009779 similar to UniRef100_A5Z2J9 Cluster: Aminotran... 107 2e-22
gnl|LJGI|BW594926 similar to UniRef100_Q43687 Cluster: Extensin-... 103 3e-21
gnl|LJGI|BW595142 weakly similar to UniRef100_A7PY01 Cluster: Ch... 70 4e-11
gnl|LJGI|TC81623 weakly similar to UniRef100_A7PRJ4 Cluster: Chr... 68 2e-10
gnl|LJGI|TC77194 similar to UniRef100_Q41707 Cluster: Extensin c... 68 2e-10
gnl|LJGI|TC82494 homologue to UniRef100_Q09085 Cluster: Hydroxyp... 58 2e-07
gnl|LJGI|TC69798 similar to UniRef100_Q41707 Cluster: Extensin c... 56 6e-07
>gnl|LJGI|TC82766 similar to UniRef100_A7P093 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (40%)
Length = 1247
Score = 410 bits (207), Expect = e-113
Identities = 393/455 (86%), Gaps = 10/455 (2%)
Strand = Plus / Plus
Query: 813 atactactataattctcctcctccaccagttgtgtatcctc---------acccacatcc 863
|||||| |||||||||||||||||||| ||||||||||| | ||||||| ||
Sbjct: 2 atactattataattctcctcctccaccggttgtgtatcccccacatccctacccacaccc 61
Query: 864 caaccaccacccattgattgtgaaggttgttggtaaagtctacagctacaggtgctatga 923
| | ||||||||||||||||||||||| || |||||||| ||||||||||||||||||||
Sbjct: 62 ctatcaccacccattgattgtgaaggtagtgggtaaagtttacagctacaggtgctatga 121
Query: 924 ctgggagtatcctgaaaagtctcataacaagaaacacctcaaaggtgccattgtggaggt 983
||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||
Sbjct: 122 ctgggagtatcctgaaaagtctcatgacaagaagcacctcaaaggtgttgttgtggaggt 181
Query: 984 gaaatgcaaagcagggaagaatatcatcaaagcctatggtaaaacaaagagcaatggcaa 1043
||||||||||| |||| ||| |||||||| ||||| || ||||| ||||| ||||| ||
Sbjct: 182 caaatgcaaagctgggaggaacatcatcaaggcctacggaaaaactaagagtaatggaaa 241
Query: 1044 gtacagcatcacagttaaggactttgactatgtaaaatatggcccgacagtgtgcaaggc 1103
|||||||||||||||||||||||||||||| | |||||||| || || |||||||||||
Sbjct: 242 gtacagcatcacagttaaggactttgactacatcaaatatggtcccactgtgtgcaaggc 301
Query: 1104 tgtgctttatgctccacctaaacactcacccttcgacctacctactaaactgaataaggg 1163
|||| |||||||||||||| ||||||||||| || |||||||||| |||||| ||||
Sbjct: 302 caggcttcatgctccacctaaagactcacccttcaacatacctactaagctgaatgaggg 361
Query: 1164 aaccaacttgaagctgaaatccaataacaagtatgaggttgtgctcaaggcaaagccatt 1223
|||| |||||||| | |||||||| ||||||||||| |||||||| || | ||||||||
Sbjct: 362 aaccgacttgaagataaaatccaaaaacaagtatgaagttgtgctaaaatctaagccatt 421
Query: 1224 tgcttatgcatcaaagaagcactttaaagaatgtg 1258
|||||| || || |||||||| ||| |||||||||
Sbjct: 422 tgcttacgcttcgaagaagca-tttgaagaatgtg 455
Score = 54.0 bits (27), Expect = 3e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 1390 tattattataagtcaccacccccaccatcaccatc 1424
||||| |||||||| ||||||||||||||||||||
Sbjct: 527 tattactataagtctccacccccaccatcaccatc 561
>gnl|LJGI|AW164126 similar to UniRef100_Q09085 Cluster: Hydroxyproline-rich
glycoprotein; n=1; Phaseolus vulgaris|Rep:
Hydroxyproline-rich glycoprotein - Phaseolus vulgaris
(Kidney bean) (French bean), partial (32%)
Length = 373
Score = 125 bits (63), Expect = 8e-28
Identities = 99/111 (89%)
Strand = Plus / Plus
Query: 668 aaccttactactacaagtctccaccaccaccttcaccatctcctccaccacactactact 727
|||| |||||||| || || || |||||||||||||||||||||||||||| ||||||||
Sbjct: 154 aaccatactactataaatcacctccaccaccttcaccatctcctccaccaccctactact 213
Query: 728 acaagtcccctcctcctccatcacctgtaccccatccaccatactattaca 778
|||| ||||||||||||||||| || || ||||||||||| ||||| ||||
Sbjct: 214 acaaatcccctcctcctccatctccagtgccccatccaccttactactaca 264
Score = 117 bits (59), Expect = 2e-25
Identities = 86/95 (90%)
Strand = Plus / Plus
Query: 700 tcaccatctcctccaccacactactactacaagtcccctcctcctccatcacctgtaccc 759
||||||||||||||||||| |||||||||||| ||||||||||||||||| || ||||||
Sbjct: 1 tcaccatctcctccaccaccctactactacaaatcccctcctcctccatctccagtaccc 60
Query: 760 catccaccatactattacaggtctccaccaccacc 794
|||||||| ||||| |||| ||| ||||| |||||
Sbjct: 61 catccaccttactactacaagtccccacccccacc 95
Score = 75.8 bits (38), Expect = 7e-13
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 499 ccaccgccttcaccatctcctccaccaccctattactacaagtctcctccacctccat 556
||||| |||||||||||||||||||||||||| |||||||| || ||||| |||||||
Sbjct: 177 ccaccaccttcaccatctcctccaccaccctactactacaaatcccctcctcctccat 234
Score = 65.9 bits (33), Expect = 7e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 508 tcaccatctcctccaccaccctattactacaagtctcctccacctccat 556
||||||||||||||||||||||| |||||||| || ||||| |||||||
Sbjct: 1 tcaccatctcctccaccaccctactactacaaatcccctcctcctccat 49
Score = 65.9 bits (33), Expect = 7e-10
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 669 accttactactacaagtctccaccaccaccttcaccatctc 709
|||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 66 accttactactacaagtccccacccccaccttcaccatctc 106
Score = 61.9 bits (31), Expect = 1e-08
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 668 aaccttactactacaagtctccaccaccaccttcaccatctcc 710
|||| |||||||||||||| ||||||||||| |||||||||||
Sbjct: 109 aaccatactactacaagtccccaccaccaccctcaccatctcc 151
Score = 60.0 bits (30), Expect = 4e-08
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 298 tataaatcaccaccaccaccttccccatcacctccacctccttacttgtacaagtcccct 357
||||||||||| ||||||||||| ||||| |||||||| || |||| ||||| ||||||
Sbjct: 165 tataaatcacctccaccaccttcaccatctcctccaccaccctactactacaaatcccct 224
Query: 358 cc 359
||
Sbjct: 225 cc 226
Score = 54.0 bits (27), Expect = 3e-06
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 721 tactactacaagtcccctcctcctccatcacctgtaccccatccaccatactattacagg 780
||||||||||| || |||||||| || ||||| | || |||||||| ||||| |||||
Sbjct: 255 tactactacaaatctcctcctcccccttcacccattccacatccaccttactactacagt 314
Query: 781 tctccaccacc 791
|||||||||||
Sbjct: 315 tctccaccacc 325
>gnl|LJGI|GO009779 similar to UniRef100_A5Z2J9 Cluster: Aminotransferase 2; n=1;
Cucumis sativus|Rep: Aminotransferase 2 - Cucumis
sativus (Cucumber), partial (24%)
Length = 443
Score = 107 bits (54), Expect = 2e-22
Identities = 81/90 (90%)
Strand = Plus / Plus
Query: 1 atgactggtagggccagaaaccccgttaggggtcgcctctggccacaaatgactatggca 60
|||||||||||||||||||||||| | |||||||||||| |||| |||||| | ||||||
Sbjct: 2 atgactggtagggccagaaaccccttaaggggtcgcctccggcctcaaatggccatggca 61
Query: 61 ttggccattgttttcatctctacaactgtg 90
||||| ||| ||||||| ||||||||||||
Sbjct: 62 ttggctattattttcatttctacaactgtg 91
>gnl|LJGI|BW594926 similar to UniRef100_Q43687 Cluster: Extensin-like protein; n=1;
Vigna unguiculata|Rep: Extensin-like protein - Vigna
unguiculata (Cowpea), partial (52%)
Length = 486
Score = 103 bits (52), Expect = 3e-21
Identities = 91/104 (87%)
Strand = Plus / Plus
Query: 28 aggggtcgcctctggccacaaatgactatggcattggccattgttttcatctctacaact 87
||||||||||| |||||||||||| | |||||||||||||||||||| || |||||||||
Sbjct: 93 aggggtcgcctttggccacaaatggccatggcattggccattgtttttatttctacaact 152
Query: 88 gtggtttctgctgctgctgatggttatatttactcttcccctcc 131
||||| || | |||||||||||||| ||||||| || |||||
Sbjct: 153 gtggtgtccgtcgctgctgatggttacctttactcctctcctcc 196
>gnl|LJGI|BW595142 weakly similar to UniRef100_A7PY01 Cluster: Chromosome chr15
scaffold_37, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr15 scaffold_37, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (15%)
Length = 142
Score = 69.9 bits (35), Expect = 4e-11
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 673 tactactacaagtctccaccaccaccttcaccatc 707
|||||||||||||||||||||||||||||||||||
Sbjct: 108 tactactacaagtctccaccaccaccttcaccatc 142
Score = 54.0 bits (27), Expect = 3e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 481 tactattacaagtctccaccaccgccttcaccatc 515
||||| ||||||||||||||||| |||||||||||
Sbjct: 108 tactactacaagtctccaccaccaccttcaccatc 142
>gnl|LJGI|TC81623 weakly similar to UniRef100_A7PRJ4 Cluster: Chromosome chr14
scaffold_27, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_27, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (10%)
Length = 551
Score = 67.9 bits (34), Expect = 2e-10
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 1387 ccatattattataagtcaccacccccaccatcaccatc 1424
||||||||||| ||||||||||||||||||||||||||
Sbjct: 23 ccatattattacaagtcaccacccccaccatcaccatc 60
Score = 52.0 bits (26), Expect = 1e-05
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 1336 cctccttattattacaagtctccacctccaccatcacc 1373
||||| |||||||||||||| ||||| |||||||||||
Sbjct: 20 cctccatattattacaagtcaccacccccaccatcacc 57
>gnl|LJGI|TC77194 similar to UniRef100_Q41707 Cluster: Extensin class 1 protein
precursor; n=2; Vigna unguiculata|Rep: Extensin class 1
protein precursor - Vigna unguiculata (Cowpea), partial
(41%)
Length = 895
Score = 67.9 bits (34), Expect = 2e-10
Identities = 67/78 (85%)
Strand = Plus / Plus
Query: 675 ctactacaagtctccaccaccaccttcaccatctcctccaccacactactactacaagtc 734
|||||| ||||||||||||||||| ||||||||||| ||||| | ||||||||||| ||
Sbjct: 1 ctactataagtctccaccaccaccatcaccatctccaccacctccatactactacaaatc 60
Query: 735 ccctcctcctccatcacc 752
|| || || ||||||||
Sbjct: 61 accaccaccaccatcacc 78
Score = 58.0 bits (29), Expect = 2e-07
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 283 ccacctccctatgagtataaatcaccaccaccaccttccccatcacctccacctccttac 342
||||||||||| | || |||||||| |||||||| ||||| |||||||| |||||||||
Sbjct: 137 ccacctccctactactacaaatcacctccaccaccatccccgtcacctccccctccttac 196
Query: 343 t 343
|
Sbjct: 197 t 197
Score = 54.0 bits (27), Expect = 3e-06
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 490 aagtctccaccaccgccttcaccatctcctccaccaccctattactacaagtctcctcca 549
|||||||||||||| || ||||||||||| ||||| || || |||||||| || || |||
Sbjct: 8 aagtctccaccaccaccatcaccatctccaccacctccatactactacaaatcaccacca 67
Query: 550 cctccat 556
|| ||||
Sbjct: 68 ccaccat 74
Score = 52.0 bits (26), Expect = 1e-05
Identities = 52/60 (86%), Gaps = 3/60 (5%)
Strand = Plus / Plus
Query: 673 tactactacaagtctccaccaccaccttcaccat---ctcctccaccacactactactac 729
||||||||||| || ||||||||||| ||||||| ||||||| || ||||||||||||
Sbjct: 47 tactactacaaatcaccaccaccaccatcaccatcccctcctccccctcactactactac 106
>gnl|LJGI|TC82494 homologue to UniRef100_Q09085 Cluster: Hydroxyproline-rich
glycoprotein; n=1; Phaseolus vulgaris|Rep:
Hydroxyproline-rich glycoprotein - Phaseolus vulgaris
(Kidney bean) (French bean), partial (38%)
Length = 665
Score = 58.0 bits (29), Expect = 2e-07
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 283 ccacctccctatgagtataaatcaccaccaccaccttccccatcacctccacctccttac 342
||||||||||| | || |||||||| |||||||| ||||| |||||||| |||||||||
Sbjct: 204 ccacctccctactactacaaatcacctccaccaccatccccgtcacctccccctccttac 263
Query: 343 t 343
|
Sbjct: 264 t 264
Score = 52.0 bits (26), Expect = 1e-05
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1399 aagtcaccacccccaccatcaccatc 1424
||||||||||||||||||||||||||
Sbjct: 6 aagtcaccacccccaccatcaccatc 31
>gnl|LJGI|TC69798 similar to UniRef100_Q41707 Cluster: Extensin class 1 protein
precursor; n=2; Vigna unguiculata|Rep: Extensin class 1
protein precursor - Vigna unguiculata (Cowpea), partial
(26%)
Length = 651
Score = 56.0 bits (28), Expect = 6e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 298 tataaatcaccaccaccaccttccccatcacctccacctccttacttgtacaagtc 353
||||| ||||||||||| |||||||| || ||||| |||||||| ||||||||||
Sbjct: 489 tataagtcaccaccacctccttccccttcccctcctcctccttatgtgtacaagtc 544