Miyakogusa Predicted Gene
- Lj0g3v0297489.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0297489.1 tr|G7KIE2|G7KIE2_MEDTR F-box family protein
OS=Medicago truncatula GN=MTR_6g042480 PE=4 SV=1,35.42,4e-16,seg,NULL;
F-box domain,F-box domain, cyclin-like; no
description,NULL,CUFF.19958.1
(1089 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC77907 similar to UniRef100_A7QVK0 Cluster: Chromosome... 2151 0.0
gnl|LJGI|AV776400 178 5e-44
gnl|LJGI|BP049486 similar to UniRef100_A5VCM5 Cluster: P-type co... 135 6e-31
>gnl|LJGI|TC77907 similar to UniRef100_A7QVK0 Cluster: Chromosome chr16 scaffold_189,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_189, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (69%)
Length = 1356
Score = 2151 bits (1085), Expect = 0.0
Identities = 1088/1089 (99%)
Strand = Plus / Plus
Query: 1 atgtctgaagtgaaaaacaatgtggatttcatccaattgcttgaacctgacatgtcaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92 atgtctgaagtgaaaaacaatgtggatttcatccaattgcttgaacctgacatgtcaata 151
Query: 61 aagattctaaaccatttggatgatccttgtgaccttgttcgtgtttctattgtttccagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 aagattctaaaccatttggatgatccttgtgaccttgttcgtgtttctattgtttccagt 211
Query: 121 tcttggcacagatttgttattgaaaatggcctttgcaagcgactttgcttaagaatgttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 tcttggcacagatttgttattgaaaatggcctttgcaagcgactttgcttaagaatgttt 271
Query: 181 cctgaaatatctcatgttgctcatagcattgagctaggaaacatgattgaaccagtatgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 cctgaaatatctcatgttgctcatagcattgagctaggaaacatgattgaaccagtatgt 331
Query: 241 aacgtgcttgacaattgggagtgtcttaagagaaatcataaagtgtacgcattcctggct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 aacgtgcttgacaattgggagtgtcttaagagaaatcataaagtgtacgcattcctggct 391
Query: 301 tctggtctgactcctacttggaaaaattgcatctcagaagcaattagtgcatccagcact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tctggtctgactcctacttggaaaaattgcatctcagaagcaattagtgcatccagcact 451
Query: 361 gataactaccctgaagaaagcattcagaatactttggagcctagggatagaactgaaaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 gataactaccctgaagaaagcattcagaatactttggagcctagggatagaactgaaaat 511
Query: 421 agattattatactggtcaagtaaaggagaaagcgatccatctgttcctgagactttaggt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 agattattatactggtcaagtaaaggagaaagcgatccatctgttcctgagactttaggt 571
Query: 481 tatcagcttatttccaaactatgtcttgttacagaaattcatgtccaaccattccaagcg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 tatcagcttatttccaaactatgtcttgttacagaaattcatgtccaaccattccaagcg 631
Query: 541 tattttcagcatggcttccctatatattcagctaaggctgtccggttcagaatgggccat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 tattttcagcatggcttccctatatattcagctaaggctgtccggttcagaatgggccat 691
Query: 601 ccaagatacccaatggaattagagagtttagtagctgatgatatggctgctaaccgcatg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 ccaagatacccaatggaattagagagtttagtagctgatgatatggctgctaaccgcatg 751
Query: 661 ctaggggatagccaattcatatggacatatacttcacctgaatttccaatgtttcaggaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 ctaggggatagccaattcatatggacatatacttcacctgaatttccaatgtttcaggaa 811
Query: 721 aaccgcttgcaaaaattcaagctacctgaacctgtcctgtcaattggaggtgtgctgctt 780
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 812 aaccgcttgcaaaaattcaagctacctgaccctgtcctgtcaattggaggtgtgctgctt 871
Query: 781 gttgagctattgggaagagttcaaaaacaagaaatggatgaattgttctacatatgcatc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 872 gttgagctattgggaagagttcaaaaacaagaaatggatgaattgttctacatatgcatc 931
Query: 841 tcccatgttcaagttgtggggcagccgctttcacccgcatttgatattaaaattcatcac 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 932 tcccatgttcaagttgtggggcagccgctttcacccgcatttgatattaaaattcatcac 991
Query: 901 ccatcaggaaagtgtaccctgaaatacttccctcaaaccgattggtgtgtgccttcaaca 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 992 ccatcaggaaagtgtaccctgaaatacttccctcaaaccgattggtgtgtgccttcaaca 1051
Query: 961 tcatcaccgacaatagagtcaaacaatccttcgcgcctgcggtcattaatgcagagtggt 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1052 tcatcaccgacaatagagtcaaacaatccttcgcgcctgcggtcattaatgcagagtggt 1111
Query: 1021 gttagacgttgggagcagattatcttgggtgcactgcttggttctggatctgttgcagtt 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1112 gttagacgttgggagcagattatcttgggtgcactgcttggttctggatctgttgcagtt 1171
Query: 1081 gatgattaa 1089
|||||||||
Sbjct: 1172 gatgattaa 1180
>gnl|LJGI|AV776400
Length = 516
Score = 178 bits (90), Expect = 5e-44
Identities = 109/116 (93%)
Strand = Plus / Minus
Query: 974 tagagtcaaacaatccttcgcgcctgcggtcattaatgcagagtggtgttagacgttggg 1033
|||| ||| || |||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 516 tagattcagacnatccttcgcgcctgcggtcattaatgcagactggtgttagactttggg 457
Query: 1034 agcagattatcttgggtgcactgcttggttctggatctgttgcagttgatgattaa 1089
|||||||||||||||||||||||| |||||||||||||||| ||||||||||||||
Sbjct: 456 agcagattatcttgggtgcactgcctggttctggatctgttncagttgatgattaa 401
>gnl|LJGI|BP049486 similar to UniRef100_A5VCM5 Cluster: P-type conjugative transfer
protein TrbJ precursor; n=1; Sphingomonas wittichii
RW1|Rep: P-type conjugative transfer protein TrbJ
precursor - Sphingomonas wittichii (strain RW1 / DSM 6014
/ JCM 10273), partial (7%)
Length = 320
Score = 135 bits (68), Expect = 6e-31
Identities = 119/129 (92%), Gaps = 8/129 (6%)
Strand = Plus / Minus
Query: 969 gacaatagagtcaaacaatccttcgcgcctgcggtcattaatgca--gagtg-gtgttag 1025
||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 320 gacaatagagtcaaacaatccttcgcgcctgcggtcattaatgcacgnagtgtgtgttag 261
Query: 1026 ac--gt-tgggagca-gattat-cttgggtgcactgcttggttctggatctgttgcagtt 1080
|| || ||||| || |||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 260 acccgtntgggaccacgattattcttgggtgcactgcttggttctggatctgttgcagtt 201
Query: 1081 gatgattaa 1089
|||||||||
Sbjct: 200 gatgattaa 192