Miyakogusa Predicted Gene

Lj0g3v0297449.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0297449.1 tr|I1N7G8|I1N7G8_SOYBN Pectinesterase OS=Glycine
max PE=3 SV=1,77.71,0,Pectinesterase,Pectinesterase, catalytic;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; Pectin
ly,CUFF.19950.1
         (570 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC81070 similar to UniRef100_A7PYC8 Cluster: Chromosome...    84   1e-15

>gnl|LJGI|TC81070 similar to UniRef100_A7PYC8 Cluster: Chromosome chr15 scaffold_37,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr15 scaffold_37, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (44%)
          Length = 1064

 Score = 83.8 bits (42), Expect = 1e-15
 Identities = 108/130 (83%)
 Strand = Plus / Plus

                                                                       
Query: 400 gatgtatctggggatgggttttgggccagagatatgacatttgagaacacagcaggtcct 459
           |||||||| |||||||| |||||||| ||||| || || ||||||||||||||||| || 
Sbjct: 132 gatgtatcaggggatggattttgggcaagagacataacgtttgagaacacagcaggccca 191

                                                                       
Query: 460 caaaagcatcaagcagtggcactaaaggttagctccgaccgatcagtcttctatagatgc 519
            ||||||| |||||||| ||||| ||    |||||||||   ||||| ||||| || |||
Sbjct: 192 gaaaagcaccaagcagttgcactcaaatcaagctccgacttctcagttttctacaggtgc 251

                     
Query: 520 agcttcaaag 529
           ||||||||||
Sbjct: 252 agcttcaaag 261