Miyakogusa Predicted Gene
- Lj0g3v0297399.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0297399.1 Non Chatacterized Hit- tr|D8G0N1|D8G0N1_9CYAN
Putative uncharacterized protein OS=Oscillatoria sp.
P,35.12,1e-18,seg,NULL; DUF1517,Protein of unknown function DUF1517;
PROKAR_LIPOPROTEIN,NULL,CUFF.19945.1
(999 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO006797 similar to UniRef100_A1A4B8 Cluster: Abcf1 pro... 894 0.0
gnl|LJGI|TC68409 weakly similar to UniRef100_A7Q5W5 Cluster: Chr... 412 e-114
gnl|LJGI|TC68001 similar to UniRef100_A7Q5W5 Cluster: Chromosome... 56 4e-07
>gnl|LJGI|GO006797 similar to UniRef100_A1A4B8 Cluster: Abcf1 protein; n=1; Mus
musculus|Rep: Abcf1 protein - Mus musculus (Mouse),
partial (6%)
Length = 618
Score = 894 bits (451), Expect = 0.0
Identities = 511/535 (95%), Gaps = 22/535 (4%)
Strand = Plus / Plus
Query: 1 atggcatcattgaatgcaaaaatggccttaaaacccgtttgtgctatcgcttcgatgctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 atggcatcattgaatgcaaaaatggccttaaaacccgtttgtgctatcgcttcgatgctt 165
Query: 61 cttgtgctgttgttactggcatgcaaactcaacttggcttcagcctcctcaggaggcgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 cttgtgctgttgttactggcatgcaaactcaacttggcttcagcctcctcaggaggcgtg 225
Query: 121 atgggagggaatttctttgattctgattcttcctcctcctcagaatcatccacgattgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 226 atgggagggaatttctttgattctgattcttcctcctcctcagaatcatccacgattaat 285
Query: 181 tcagagcccctgcatcgacgtgaagaagaagctcattcttctcctggtgatgctgatggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 tcagagcccctgcatcgacgtgaagaagaagctcattcttctcctggtgatgctgatggg 345
Query: 241 cttggctggggaacacacggtggagtacttatgtttctgatcttcatatttggtgtgttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 cttggctggggaacacacggtggagtacttatgtttctgatcttcatatttggtgtgttt 405
Query: 301 tttgttggattttgtaaagacaccgatgcaaatactattactctctgcaagcttcaggtt 360
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 tttgttggattttgcaaagacaccgatgcaaatactattactctctgcaagcttcaggtt 465
Query: 361 gcgatgtttggcgggagtaaaggaagctcgatacaaagggatctaactaggattgcaaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 gcgatgtttggcgggagtaaaggaagctcgatacaaagggatctaactaggattgcaaaa 525
Query: 421 gctgcagatacttcctctagggaaggtgtgagccatctattgacagagaccatacaggct 480
||||||||||||||||||||||| ||||||||||||||||
Sbjct: 526 gctgcagatacttcctctaggga---------------------agagaccatacaggct 564
Query: 481 ttggatcggcatcctagttactctattgcaggatattcatctgtgggtcaaaagc 535
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 565 ttggatcggcatcctagttactctattgca-gatattcatctgtgggtcaaaagc 618
>gnl|LJGI|TC68409 weakly similar to UniRef100_A7Q5W5 Cluster: Chromosome chr14
scaffold_54, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_54, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (43%)
Length = 731
Score = 412 bits (208), Expect = e-114
Identities = 297/326 (91%), Gaps = 3/326 (0%)
Strand = Plus / Plus
Query: 677 cgttgaatgtaaaggaaagtacaactgaatcacagaaatttgaagaagaggaacttctca 736
||||| || ||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 316 cgttggatataaaggaaagtgcagatgaatcacagaaatttgaagaagaggaacttctca 375
Query: 737 atgggcttggtgacgagtacatagtggtaacaatcttggtagctgctaaaggagcacata 796
| | | ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 376 aagtgtttggtaacgagtacatagtggtaacaatcttggtagctgctaaaggaacacata 435
Query: 797 agcttcctaaca---atggagctgaagatttgaagaaagccttacaaaagcttagatcca 853
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 agcttcctaacaacaatggagctgaagatttgaagaaagccttacaaaagcttagatcca 495
Query: 854 ttctccttctcccaagcaaattattagctggtgaggtgttatggaccccactaaaagagg 913
||||||||||||||||||||||||||||||||||||| |||||||| |||| ||||||||
Sbjct: 496 ttctccttctcccaagcaaattattagctggtgaggttttatggacgccacaaaaagagg 555
Query: 914 gtgacactctttcagaacggaaactacttgaagactaccctcaattagcagaatgtatga 973
||| | |||| ||| ||||||||||||| ||||||||||||| |||| ||| | |||||
Sbjct: 556 atgaaagtcttccaggacggaaactacttaaagactaccctcatttagtagagtctatga 615
Query: 974 aaagctttatagttaagaaacaggaa 999
||||||||| ||||||||| |||||
Sbjct: 616 aaagctttagggttaagaaagaggaa 641
Score = 167 bits (84), Expect = 2e-40
Identities = 167/192 (86%), Gaps = 2/192 (1%)
Strand = Plus / Plus
Query: 424 gcagatacttcctctagggaaggtgtgagccatctattgacagagaccatacaggctttg 483
||||| ||||||||| |||||||||||||||||||||||| |||||| ||| ||||||||
Sbjct: 3 gcagacacttcctctcgggaaggtgtgagccatctattgatagagacaatagaggctttg 62
Query: 484 gatcggcatcctagttactc-tattgcaggatattcatctgtgggtcaaaagcagagtat 542
||| |||| ||||||| ||| ||||||||||||||||||||| | || || | || ||
Sbjct: 63 gataggcaacctagtt-ctcttattgcaggatattcatctgttgatctaatgaaggatag 121
Query: 543 ggaggatgggaagaaatgctatgatcaactatcaaatgaagaaaggggaaaatttgataa 602
||||| || |||||||| || ||||||||||||||||||||||||||||||||||| |
Sbjct: 122 ggagggtgtgaagaaatacttcaatcaactatcaaatgaagaaaggggaaaatttgatga 181
Query: 603 agagacattagt 614
|| |||||||||
Sbjct: 182 agtgacattagt 193
>gnl|LJGI|TC68001 similar to UniRef100_A7Q5W5 Cluster: Chromosome chr14 scaffold_54,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_54, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (39%)
Length = 861
Score = 56.0 bits (28), Expect = 4e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 754 tacatagtggtaacaatcttggtagctgctaaaggagcacataagcttccta 805
||||||||| |||||||||||| |||||| |||||| |||||| |||||||
Sbjct: 124 tacatagtgataacaatcttggcagctgccgaaggagaacataaacttccta 175
Score = 56.0 bits (28), Expect = 4e-07
Identities = 73/88 (82%)
Strand = Plus / Plus
Query: 866 caagcaaattattagctggtgaggtgttatggaccccactaaaagagggtgacactcttt 925
|||||| |||||| || | |||||||||||||||||||| || ||| ||| ||||| |
Sbjct: 233 caagcagattattggccgttgaggtgttatggaccccacagaatgagaatgatactctct 292
Query: 926 cagaacggaaactacttgaagactaccc 953
| |||||| | ||||||||||||||||
Sbjct: 293 ccgaacgggagttacttgaagactaccc 320