Miyakogusa Predicted Gene
- Lj0g3v0296659.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0296659.1 tr|B9N9X7|B9N9X7_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_787374 PE=4
SV=1,29.24,3e-18,FAMILY NOT NAMED,NULL; seg,NULL; LEURICHRPT,NULL; no
description,NULL; LRR_1,Leucine-rich repeat; LR,CUFF.19884.1
(1555 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76205 weakly similar to UniRef100_A7QGE7 Cluster: Chr... 260 2e-68
gnl|LJGI|TC78805 weakly similar to UniRef100_A7Q539 Cluster: Chr... 248 9e-65
gnl|LJGI|TC58654 weakly similar to UniRef100_A7QGE1 Cluster: Chr... 82 1e-14
>gnl|LJGI|TC76205 weakly similar to UniRef100_A7QGE7 Cluster: Chromosome undetermined
scaffold_91, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_91, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(17%)
Length = 969
Score = 260 bits (131), Expect = 2e-68
Identities = 379/462 (82%), Gaps = 6/462 (1%)
Strand = Plus / Plus
Query: 1090 ataccacaaagtataacaaaacttgtggcactagcaggcttaaatctttcaaggaataat 1149
|||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||
Sbjct: 156 ataccacaaagtataacaaaacttgtggcattagctggcttaaatctttcaaggaataat 215
Query: 1150 ctcataggatttattcccaacaacattggtcaaatggaaagattggaatcacttgatttg 1209
||| |||| |||||||||||||||||||| |||||| | |||||||||||||| ||
Sbjct: 216 ctctctggatccattcccaacaacattggtcatatggaatggttggaatcacttgactta 275
Query: 1210 tcaagaaactcactttacggtagaatgccggaaagcttttcaaatttgagttttcttagc 1269
||||||||| || | ||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 276 tcaagaaaccatctctctggtagaatgcccgcaagcttttcaaatttgagttttcttagc 335
Query: 1270 ttcatggacctgtctttcaacaacttatctggaaaaattccacttggcactcaactacaa 1329
|||| || |||| || ||||| ||||| || |||||| || || ||||||||||||
Sbjct: 336 gacatgaacttgtcctttaacaatttatcagggaaaattacaacaggaactcaactacaa 395
Query: 1330 tcctttgatgcctctacatatatagggaataatgggctttgtggccctccacttacaaac 1389
|||||| | |||| ||||||| ||||| | | |||||||||| || || |||||
Sbjct: 396 tcctttaagccctcgtcatatattgggaacactctactttgtggccaacctctcacaaat 455
Query: 1390 caatgtccaggggatgtgactttatcaactaaaatacctgacgaatatgctactgatgaa 1449
|| |||| ||||||||||| | | ||||| || |||||| || ||| ||||||||
Sbjct: 456 cattgtcaaggggatgtgatgtcaccaactggaagtcctgacaaacatgttactgatg-- 513
Query: 1450 gacaaagatgaagatgagctcataaccattggattttacgtcagcctagggcttggattt 1509
||||||||||| || |||||||| ||| |||||| ||||||||| |||||| |||
Sbjct: 514 ----aagatgaagataagttcataacctatgggttttacatcagcctagtgcttgggttt 569
Query: 1510 tatgttggattttggggagtttttggagctttagttataaaa 1551
|||||||||||||||||| | |||| | ||||||||||||
Sbjct: 570 attgttggattttggggagtctgtggaaccttagttataaaa 611
>gnl|LJGI|TC78805 weakly similar to UniRef100_A7Q539 Cluster: Chromosome undetermined
scaffold_51, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_51, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(35%)
Length = 1134
Score = 248 bits (125), Expect = 9e-65
Identities = 269/317 (84%)
Strand = Plus / Plus
Query: 1066 tcttgcaaccaattaacaggagatataccacaaagtataacaaaacttgtggcactagca 1125
||||||||||| || ||||| || |||||||||||||||||||||||||||||| ||||
Sbjct: 354 tcttgcaaccacttgacaggtgagataccacaaagtataacaaaacttgtggcattagct 413
Query: 1126 ggcttaaatctttcaaggaataatctcataggatttattcccaacaacattggtcaaatg 1185
|||||||||||||||| ||| |||||| |||| ||||||||||||||||||||||||
Sbjct: 414 agcttaaatctttcaagtaatgatctcacgggatccattcccaacaacattggtcaaatg 473
Query: 1186 gaaagattggaatcacttgatttgtcaagaaactcactttacggtagaatgccggaaagc 1245
||||||||||| |||||||| || ||||||||| || ||||||||||| |||
Sbjct: 474 gaaagattggagtcacttgacttatcaagaaaccatctcggtggtagaatgcctacaagt 533
Query: 1246 ttttcaaatttgagttttcttagcttcatggacctgtctttcaacaacttatctggaaaa 1305
||||| |||||||| ||||| |||| |||| || | || ||||||||||||| ||| ||
Sbjct: 534 ttttcgaatttgagctttctaagctacatgaacttatccttcaacaacttatatggggaa 593
Query: 1306 attccacttggcactcaactacaatcctttgatgcctctacatatatagggaataatggg 1365
|||||| | ||||||||||| ||||| ||| |||||||| ||||||| ||||| || |||
Sbjct: 594 attccaataggcactcaactgcaatcttttaatgcctcttcatatattgggaacaagggg 653
Query: 1366 ctttgtggccctccact 1382
||||||||||| |||||
Sbjct: 654 ctttgtggcccaccact 670
Score = 139 bits (70), Expect = 6e-32
Identities = 175/210 (83%)
Strand = Plus / Plus
Query: 717 aggaacattatctgcatgggtaggccttcacctgcatcatttgattgttttgagtctacg 776
|||||||||| | ||||||||||||| |||||||| ||| ||||||||||||||||| ||
Sbjct: 2 aggaacattaccagcatgggtaggccatcacctgcctcagttgattgttttgagtcttcg 61
Query: 777 agcaaataagttccaaggaagattaccgagcagtttgtgtaatctaccatttcttcgagt 836
| ||||||||||||||||| | |||| ||| ||||| ||||| ||||||||| |||
Sbjct: 62 ggaaaataagttccaaggaaaaatacctgaaagtctgtgtgatctatcatttcttcaagt 121
Query: 837 tttagatatttctcaaaacaatatcacaggagaaatctctcaatgcctcaatcaaataac 896
||||||| ||||| || ||||| |||| ||||| | |||||||||||||| ||||
Sbjct: 122 tttagatctttcttggaataatatttcaggggaaataccacaatgcctcaatcacataat 181
Query: 897 tgctttatcaaatgttcaatttccaagaaa 926
|||||| |||||| || ||||||||||||
Sbjct: 182 tgctttgtcaaatattacatttccaagaaa 211
Score = 63.9 bits (32), Expect = 3e-09
Identities = 80/96 (83%)
Strand = Plus / Plus
Query: 1456 gatgaagatgagctcataaccattggattttacgtcagcctagggcttggattttatgtt 1515
||||||||| || ||||||| |||| |||||| || ||| | |||||| |||| |||
Sbjct: 717 gatgaagataagatcataacttttgggttttacatcgccctggtgcttgggtttttcgtt 776
Query: 1516 ggattttggggagtttttggagctttagttataaaa 1551
|||||||||||||||| |||| ||||||| ||||||
Sbjct: 777 ggattttggggagtttgtggaactttagtcataaaa 812
>gnl|LJGI|TC58654 weakly similar to UniRef100_A7QGE1 Cluster: Chromosome undetermined
scaffold_91, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_91, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(7%)
Length = 774
Score = 81.8 bits (41), Expect = 1e-14
Identities = 80/93 (86%)
Strand = Plus / Plus
Query: 1459 gaagatgagctcataaccattggattttacgtcagcctagggcttggattttatgttgga 1518
|||||| | ||||||||| |||| |||||| ||| ||| | |||||| |||| |||||||
Sbjct: 87 gaagataaactcataacctttgggttttacatcaccctggtgcttgggttttttgttgga 146
Query: 1519 ttttggggagtttttggagctttagttataaaa 1551
||||||||||||| |||| ||||||| ||||||
Sbjct: 147 ttttggggagtttgtggaactttagtcataaaa 179