Miyakogusa Predicted Gene

Lj0g3v0296579.1
Show Alignment:  
BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0296579.1 Non Chatacterized Hit- tr|K3ZR41|K3ZR41_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si029071,30.17,2e-18,seg,NULL; coiled-coil,NULL,CUFF.19979.1
         (1167 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC78959 weakly similar to UniRef100_A7PQN5 Cluster: Chr...   432   e-120

>gnl|LJGI|TC78959 weakly similar to UniRef100_A7PQN5 Cluster: Chromosome chr6
            scaffold_25, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome chr6 scaffold_25, whole genome
            shotgun sequence - Vitis vinifera (Grape), partial (10%)
          Length = 723

 Score =  432 bits (218), Expect = e-120
 Identities = 231/234 (98%), Gaps = 1/234 (0%)
 Strand = Plus / Plus

                                                                        
Query: 934  atgaattggattgatgaatctagtgctctagaaggagaacagccggaagaagttattcaa 993
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    atgaattggattgatgaatctagtgctctagaaggagaacagccggaagaagttattcaa 60

                                                                        
Query: 994  aatgaaggaagcgattggcatcagagtaacactgaatggagaaatagcactgatgaaagt 1053
            ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   aatgaaggaagcgat-ggcatcagagtaacactgaatggagaaatagcactgatgaaagt 119

                                                                        
Query: 1054 gttgatgataatcaacacagtaatacaacaaatgagtggcatgagaacagtttggcaaat 1113
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120  gttgatgataatcaacacagtaatacaacaaatgagtggcatgagaacagtttggcaaat 179

                                                                  
Query: 1114 gaggatggagaaaactctcggcttcaagaggctcctgaagggtggcagggagac 1167
            |||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 180  gaggatggagaaaactctcggcttcaagaggctcctgaagtgtggcaggaagac 233