Miyakogusa Predicted Gene
- Lj0g3v0295669.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0295669.1 Non Chatacterized Hit- tr|I3S9N9|I3S9N9_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.54,0,Ras,Small
GTPase superfamily; P-loop containing nucleoside triphosphate
hydrolases,NULL; RASTRNSFRMN,CUFF.19800.1
(657 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC64728 homologue to UniRef100_Q08149 Cluster: GTP-bind... 1302 0.0
gnl|LJGI|TC58220 RAB11I [Lotus japonicus] 349 1e-95
gnl|LJGI|AU088863 homologue to UniRef100_Q40199 Cluster: RAB11I;... 295 2e-79
gnl|LJGI|TC57268 homologue to UniRef100_Q08149 Cluster: GTP-bind... 250 9e-66
gnl|LJGI|TC62555 homologue to UniRef100_Q08150 Cluster: GTP-bind... 92 5e-18
gnl|LJGI|TC79726 UniRef100_Q40196 Cluster: RAB11F; n=1; Lotus ja... 66 3e-10
gnl|LJGI|TC71887 UniRef100_Q40194 Cluster: Ras-related protein R... 60 2e-08
gnl|LJGI|TC60126 UniRef100_Q40193 Cluster: Ras-related protein R... 58 7e-08
gnl|LJGI|TC59232 similar to UniRef100_A7QWW2 Cluster: Chromosome... 58 7e-08
gnl|LJGI|TC57539 UniRef100_Q40191 Cluster: Ras-related protein R... 52 4e-06
>gnl|LJGI|TC64728 homologue to UniRef100_Q08149 Cluster: GTP-binding protein; n=1;
Pisum sativum|Rep: GTP-binding protein - Pisum sativum
(Garden pea), complete
Length = 1184
Score = 1302 bits (657), Expect = 0.0
Identities = 657/657 (100%)
Strand = Plus / Plus
Query: 1 atgggtgcgtacagagcggatgatgattatgattacttgttcaaggtggttctgatcgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 atgggtgcgtacagagcggatgatgattatgattacttgttcaaggtggttctgatcgga 302
Query: 61 gactctggcgttgggaaatccaatctattgtctcgattcaccaaaaatgagtttagcttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 gactctggcgttgggaaatccaatctattgtctcgattcaccaaaaatgagtttagcttg 362
Query: 121 gaatccaaatccaccattggtgttgaattcgccacccgcagtatccatgttgatgataag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 gaatccaaatccaccattggtgttgaattcgccacccgcagtatccatgttgatgataag 422
Query: 181 attgtaaaggcgcaaatttgggacaccgctggccaagaaagatatcgtgcaatcacaagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 attgtaaaggcgcaaatttgggacaccgctggccaagaaagatatcgtgcaatcacaagc 482
Query: 241 gcatattatcgaggagctgttggtgcattgcttgtgtatgatgttactagacatgtgact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 gcatattatcgaggagctgttggtgcattgcttgtgtatgatgttactagacatgtgact 542
Query: 301 tttgaaaatgtggagagatggttaaaggaacttcgtgatcacacagatgccaacatcgta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 tttgaaaatgtggagagatggttaaaggaacttcgtgatcacacagatgccaacatcgta 602
Query: 361 attatgcttgtgggaaacaaggcagatcttcgtcacttgcgtgccgtgtccaccgatgat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 attatgcttgtgggaaacaaggcagatcttcgtcacttgcgtgccgtgtccaccgatgat 662
Query: 421 gccaaggggtttgctgaaagggaaaatacttttttcatggaaacctctgccctcgagtcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 gccaaggggtttgctgaaagggaaaatacttttttcatggaaacctctgccctcgagtcc 722
Query: 481 ttgaatgtcgacaatgctttcacagaggttctcactcagatatatcgagttgttagtaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 ttgaatgtcgacaatgctttcacagaggttctcactcagatatatcgagttgttagtaag 782
Query: 541 aagacgctcgagatcggggatgaccctgcagccttgcccaaggggcagacaatcaatgtt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 aagacgctcgagatcggggatgaccctgcagccttgcccaaggggcagacaatcaatgtt 842
Query: 601 ggcagtaaagatgatgtctcagctgttaaaaaggttggatgctgctcggcatagttt 657
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 843 ggcagtaaagatgatgtctcagctgttaaaaaggttggatgctgctcggcatagttt 899
>gnl|LJGI|TC58220 RAB11I [Lotus japonicus]
Length = 1015
Score = 349 bits (176), Expect = 1e-95
Identities = 511/624 (81%), Gaps = 9/624 (1%)
Strand = Plus / Plus
Query: 34 tacttgttcaaggtggttctgatcggagactctggcgttgggaaatccaatctattgtct 93
|||||||||||| |||| ||||||||||||| || || || || ||||| || | |||
Sbjct: 181 tacttgttcaagctggtgttgatcggagactccggtgtcggcaagtccaacctgctttct 240
Query: 94 cgattcaccaaaaatgagtttagcttggaatccaaatccaccattggtgttgaattcgcc 153
||||||||| || ||||| | |||||| ||||| |||||||| || ||||||||||||
Sbjct: 241 cgattcacccggaacgagttcaacttggagtccaagtccaccatcggcgttgaattcgcc 300
Query: 154 acccgcagtatccatgttgatgataagattgtaaaggcgcaaatttgggacaccgctggc 213
|||||||| ||| | ||||||||| ||| ||||||||||| ||||||||||||||
Sbjct: 301 acccgcagcgtccgcatccatgataagactgtcaaggcgcaaatctgggacaccgctggt 360
Query: 214 caagaaagatatcgtgcaatcacaagcgcatattatcgaggagctgttggtgcattgctt 273
||||||||||| |||||||||||||| || || ||| |||||||||||||||||||| ||
Sbjct: 361 caagaaagataccgtgcaatcacaagtgcttactatagaggagctgttggtgcattgatt 420
Query: 274 gtgtatgatgttactagacatgtgacttttgaaaatgtggagagatggttaaaggaactt 333
||||||||||| || || || |||||||||||||| ||| |||| ||| | ||||| |||
Sbjct: 421 gtgtatgatgtgaccaggcaagtgacttttgaaaacgtgcagaggtggctgaaggagctt 480
Query: 334 cgtgatcacacagatgccaacatcgtaattatgcttgtgggaaacaaggcagatcttcgt 393
| |||||||| ||||||||||| ||||| |||||||| ||||||||||||||||||||
Sbjct: 481 agggatcacactgatgccaacattgtaatcatgcttgttggaaacaaggcagatcttcgc 540
Query: 394 cacttgcgtgccgtgtccaccgatgatgccaaggggtttgctgaaagggaaaatactttt 453
|| |||||||||||| |||| || || |||| | |||||||| || ||||| || | |
Sbjct: 541 catttgcgtgccgtgcccactgaagaagccactgcatttgctgagagagaaaacacctat 600
Query: 454 ttcatggaaacctctgccctcgagtccttgaatgtcgacaatgctttcacagaggttctc 513
|||||||| |||||||| || ||||||||||| || ||||||||||||| ||| || |||
Sbjct: 601 ttcatggagacctctgcactggagtccttgaacgtggacaatgctttcatagaagtgctc 660
Query: 514 actcagatatatcgagttgttagtaagaagacgctcgagatcggggatgaccctgcagcc 573
|| ||||||| ||||| || | |||||| || |||| ||| ||||||||| |||
Sbjct: 661 tctgagatatacaatgttgtgagcaggaagactcttgagaaggggaatgaccctggggcc 720
Query: 574 ttgcccaaggggcagacaatcaatgttggcagtaaagatgatgtctcagctgttaaaaag 633
||||| |||||||||| ||||| |||| |||||| ||||| |||||||||
Sbjct: 721 ttgcctcaggggcagaccatcaaccttgg---------tgatgtttcagcagttaaaaag 771
Query: 634 gttggatgctgctcggcatagttt 657
||||||||||||||| ||||||
Sbjct: 772 cctggatgctgctcggcgtagttt 795
>gnl|LJGI|AU088863 homologue to UniRef100_Q40199 Cluster: RAB11I; n=1; Lotus
japonicus|Rep: RAB11I - Lotus japonicus, complete
Length = 680
Score = 295 bits (149), Expect = 2e-79
Identities = 308/361 (85%)
Strand = Plus / Plus
Query: 142 gttgaattcgccacccgcagtatccatgttgatgataagattgtaaaggcgcaaatttgg 201
|||||||||||||||||||| ||| | ||||||||| ||| ||||||||||| |||
Sbjct: 10 gttgaattcgccacccgcagcgtccgcatccatgataagactgtcaaggcgcaaatctgg 69
Query: 202 gacaccgctggccaagaaagatatcgtgcaatcacaagcgcatattatcgaggagctgtt 261
||||||||||| ||||||||||| |||||||||||||| || || ||| |||||||||||
Sbjct: 70 gacaccgctggtcaagaaagataccgtgcaatcacaagtgcttactatagaggagctgtt 129
Query: 262 ggtgcattgcttgtgtatgatgttactagacatgtgacttttgaaaatgtggagagatgg 321
||||||||| ||||||||||||| || || || |||||||||||||| ||| |||| |||
Sbjct: 130 ggtgcattgattgtgtatgatgtgaccaggcaagtgacttttgaaaacgtgcagaggtgg 189
Query: 322 ttaaaggaacttcgtgatcacacagatgccaacatcgtaattatgcttgtgggaaacaag 381
| ||||| ||| | |||||||| ||||||||||| ||||| |||||||| |||||||||
Sbjct: 190 ctgaaggagcttagggatcacactgatgccaacattgtaatcatgcttgttggaaacaag 249
Query: 382 gcagatcttcgtcacttgcgtgccgtgtccaccgatgatgccaaggggtttgctgaaagg 441
||||||||||| || |||||||||||| |||| || || |||| | |||||||| ||
Sbjct: 250 gcagatcttcgccatttgcgtgccgtgcccactgaagaagccactgcatttgctgagaga 309
Query: 442 gaaaatacttttttcatggaaacctctgccctcgagtccttgaatgtcgacaatgctttc 501
||||| || | ||||||||| |||||||| || ||||||||||| || ||||||||||||
Sbjct: 310 gaaaacacctatttcatggagacctctgcactggagtccttgaacgtggacaatgctttc 369
Query: 502 a 502
|
Sbjct: 370 a 370
>gnl|LJGI|TC57268 homologue to UniRef100_Q08149 Cluster: GTP-binding protein; n=1;
Pisum sativum|Rep: GTP-binding protein - Pisum sativum
(Garden pea), complete
Length = 1234
Score = 250 bits (126), Expect = 9e-66
Identities = 483/602 (80%)
Strand = Plus / Plus
Query: 1 atgggtgcgtacagagcggatgatgattatgattacttgttcaaggtggttctgatcgga 60
||||| ||||||||||| ||||||||||| ||||| ||||||||||||| |||| ||
Sbjct: 217 atgggggcgtacagagctgatgatgattacgattatctgttcaaggtggtgttgattggg 276
Query: 61 gactctggcgttgggaaatccaatctattgtctcgattcaccaaaaatgagtttagcttg 120
||||| || || || ||||||||||| | || | |||||||| |||||||| ||| |
Sbjct: 277 gactcaggtgtgggaaaatccaatcttctttcaaggttcaccaagaatgagttcagcctt 336
Query: 121 gaatccaaatccaccattggtgttgaattcgccacccgcagtatccatgttgatgataag 180
|||||||| ||||||||||| |||||||| |||||| | || || ||||||||||||
Sbjct: 337 gaatccaagtccaccattggggttgaatttgccaccagaagcattagggttgatgataag 396
Query: 181 attgtaaaggcgcaaatttgggacaccgctggccaagaaagatatcgtgcaatcacaagc 240
|||| ||||| ||||||||||| || ||||| |||||||| || || ||||| |||||
Sbjct: 397 gttgtcaaggctcaaatttgggatactgctggtcaagaaaggtaccgagcaataacaagt 456
Query: 241 gcatattatcgaggagctgttggtgcattgcttgtgtatgatgttactagacatgtgact 300
||||||||||||||||||||||| || || || || ||||||||||| | ||||| ||
Sbjct: 457 gcatattatcgaggagctgttggcgctttactagtctatgatgttacccgccatgtaaca 516
Query: 301 tttgaaaatgtggagagatggttaaaggaacttcgtgatcacacagatgccaacatcgta 360
|| |||||||||||||||||| | || || || | |||||||||||| ||||||| ||
Sbjct: 517 ttcgaaaatgtggagagatggctgaaagagctgagagatcacacagataccaacattgtt 576
Query: 361 attatgcttgtgggaaacaaggcagatcttcgtcacttgcgtgccgtgtccaccgatgat 420
| ||||| || || ||||| || ||||| ||||| ||||| || || ||||| || |||
Sbjct: 577 gtgatgctcgtagggaacaaagcggatctgcgtcatttgcgagcggtttccactgaagat 636
Query: 421 gccaaggggtttgctgaaagggaaaatacttttttcatggaaacctctgccctcgagtcc 480
| | || ||||||||| | || || || |||||||||||||| |||||||| || ||
Sbjct: 637 tctacggcttttgctgaacgagagaacacatttttcatggaaacatctgcccttgaatcg 696
Query: 481 ttgaatgtcgacaatgctttcacagaggttctcactcagatatatcgagttgttagtaag 540
|||||||| || || || |||||||| || | || ||||| ||||| ||||| || |||
Sbjct: 697 ttgaatgtggaaaacgccttcacagaagtgttgacccagatctatcgcgttgtgagcaag 756
Query: 541 aagacgctcgagatcggggatgaccctgcagccttgcccaaggggcagacaatcaatgtt 600
||| | || ||||| || ||||| || || || || ||||| || |||||||| ||||||
Sbjct: 757 aaggcccttgagattggtgatgatccagctgctttacccaaaggacagacaattaatgtt 816
Query: 601 gg 602
||
Sbjct: 817 gg 818
>gnl|LJGI|TC62555 homologue to UniRef100_Q08150 Cluster: GTP-binding protein; n=2;
Vicieae|Rep: GTP-binding protein - Pisum sativum (Garden
pea), complete
Length = 992
Score = 91.7 bits (46), Expect = 5e-18
Identities = 160/198 (80%)
Strand = Plus / Plus
Query: 199 tgggacaccgctggccaagaaagatatcgtgcaatcacaagcgcatattatcgaggagct 258
|||||||||||||||||||| || |||||||||||||| || ||||| ||||| || |||
Sbjct: 367 tgggacaccgctggccaagagaggtatcgtgcaatcacgagtgcatactatcggggtgct 426
Query: 259 gttggtgcattgcttgtgtatgatgttactagacatgtgacttttgaaaatgtggagaga 318
| |||||| | |||||||||||||| || |||||| || ||||| ||||| || |||
Sbjct: 427 ctaggtgcacttcttgtgtatgatgtcacgcgacatgcaacatttgagaatgtcgacaga 486
Query: 319 tggttaaaggaacttcgtgatcacacagatgccaacatcgtaattatgcttgtgggaaac 378
||| | || || || || | ||||||||| ||||||| || | |||||||| || |||
Sbjct: 487 tggctcaaagagctgcggaaccacacagattccaacattgttgtgatgcttgttgggaac 546
Query: 379 aaggcagatcttcgtcac 396
|| |||| |||||||||
Sbjct: 547 aaatcagaccttcgtcac 564
>gnl|LJGI|TC79726 UniRef100_Q40196 Cluster: RAB11F; n=1; Lotus japonicus|Rep: RAB11F
- Lotus japonicus, complete
Length = 1099
Score = 65.9 bits (33), Expect = 3e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 30 tgattacttgttcaaggtggttctgatcggagactctggcgttgggaaatccaatct 86
||||||| ||||||||| |||||||| ||||||||||| ||||||||||| |||||
Sbjct: 139 tgattacctgttcaaggctgttctgattggagactctggagttgggaaatcaaatct 195
>gnl|LJGI|TC71887 UniRef100_Q40194 Cluster: Ras-related protein Rab11D; n=1; Lotus
japonicus|Rep: Ras-related protein Rab11D - Lotus
japonicus, complete
Length = 1340
Score = 60.0 bits (30), Expect = 2e-08
Identities = 81/98 (82%)
Strand = Plus / Plus
Query: 187 aaggcgcaaatttgggacaccgctggccaagaaagatatcgtgcaatcacaagcgcatat 246
||||| || ||||||||||| ||||| || ||||| || ||||| || || || || ||
Sbjct: 472 aaggctcagatttgggacactgctggtcaggaaaggtaccgtgccattactagtgcttac 531
Query: 247 tatcgaggagctgttggtgcattgcttgtgtatgatgt 284
|| ||||||||||||||||| || ||||| ||||||||
Sbjct: 532 taccgaggagctgttggtgccttacttgtctatgatgt 569
>gnl|LJGI|TC60126 UniRef100_Q40193 Cluster: Ras-related protein Rab11C; n=1; Lotus
japonicus|Rep: Ras-related protein Rab11C - Lotus
japonicus, complete
Length = 1175
Score = 58.0 bits (29), Expect = 7e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 116 gcttggaatccaaatccaccattggtgttgaattcgccacc 156
||||||| |||||||| || |||||||||||||||||||||
Sbjct: 338 gcttggagtccaaatctactattggtgttgaattcgccacc 378
>gnl|LJGI|TC59232 similar to UniRef100_A7QWW2 Cluster: Chromosome chr13 scaffold_210,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_210, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (90%)
Length = 1128
Score = 58.0 bits (29), Expect = 7e-08
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 187 aaggcgcaaatttgggacaccgctggccaagaaagatatcgtgcaatcacaagcgcatat 246
||||| ||||| ||||||||||||||||||||||| || | ||| | || || ||||||
Sbjct: 317 aaggctcaaatatgggacaccgctggccaagaaaggtacagggcagtaactagtgcatat 376
Query: 247 tatcgaggagctgttgg 263
||||| || ||||||||
Sbjct: 377 tatcgcggcgctgttgg 393
>gnl|LJGI|TC57539 UniRef100_Q40191 Cluster: Ras-related protein Rab11A; n=1; Lotus
japonicus|Rep: Ras-related protein Rab11A - Lotus
japonicus, complete
Length = 985
Score = 52.0 bits (26), Expect = 4e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 109 gagtttagcttggaatccaaatccaccattggtgttgaattc 150
||||| |||||||| ||||| ||||| |||||||||||||||
Sbjct: 183 gagttcagcttggactccaagtccacgattggtgttgaattc 224