Miyakogusa Predicted Gene

Lj0g3v0295499.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0295499.1 CUFF.19785.1
         (378 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC81853 similar to UniRef100_A7QPK1 Cluster: Chromosome...   392   e-109
gnl|LJGI|AV407756 similar to UniRef100_A7QPK1 Cluster: Chromosom...   180   4e-45

>gnl|LJGI|TC81853 similar to UniRef100_A7QPK1 Cluster: Chromosome chr18 scaffold_137,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_137, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (34%)
          Length = 728

 Score =  392 bits (198), Expect = e-109
 Identities = 204/206 (99%)
 Strand = Plus / Plus

                                                                       
Query: 173 ttatggagacatcaagcgcccttttaaaatatttggacgggaaaggactattgggccttg 232
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 ttatggagacatcaagcgcccttttaaaatatttggacgggaaaggactattgggccttg 451

                                                                       
Query: 233 gaagaatgcccaaaggtttgttccttcctcggaggaggaaatggaggctaagtacagaaa 292
           ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 452 gaagaatgctcaaaggtttgttccttcctctgaggaggaaatggaggctaagtacagaaa 511

                                                                       
Query: 293 ggctaagtctaatcctgactatgtccgactacgagaggatgctgaggttattggaacatg 352
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 ggctaagtctaatcctgactatgtccgactacgagaggatgctgaggttattggaacatg 571

                                     
Query: 353 ggatgatcatgattacggattaaatg 378
           ||||||||||||||||||||||||||
Sbjct: 572 ggatgatcatgattacggattaaatg 597


>gnl|LJGI|AV407756 similar to UniRef100_A7QPK1 Cluster: Chromosome chr18 scaffold_137,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_137, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (16%)
          Length = 426

 Score =  180 bits (91), Expect = 4e-45
 Identities = 97/99 (97%)
 Strand = Plus / Plus

                                                                       
Query: 173 ttatggagacatcaagcgcccttttaaaatatttggacgggaaaggactattgggccttg 232
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 ttatggagacatcaagcgcccttttaaaatatttggacgggaaaggactattgggccttg 387

                                                  
Query: 233 gaagaatgcccaaaggtttgttccttcctcggaggagga 271
           ||||||||| |||||||||||||||||||| ||||||||
Sbjct: 388 gaagaatgctcaaaggtttgttccttcctctgaggagga 426