Miyakogusa Predicted Gene

Lj0g3v0295169.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0295169.1 tr|A8W458|A8W458_LOTJA DUF593-2 protein OS=Lotus
japonicus PE=2 SV=1,90,0.035,seg,NULL,CUFF.19772.1
         (373 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV776532 similar to UniRef100_A8W458 Cluster: DUF593-2 ...   196   7e-50
gnl|LJGI|TC68750 UniRef100_A8W458 Cluster: DUF593-2 protein; n=1...   109   1e-23

>gnl|LJGI|AV776532 similar to UniRef100_A8W458 Cluster: DUF593-2 protein; n=1; Lotus
           japonicus|Rep: DUF593-2 protein - Lotus japonicus,
           partial (7%)
          Length = 332

 Score =  196 bits (99), Expect = 7e-50
 Identities = 105/107 (98%)
 Strand = Plus / Minus

                                                                       
Query: 8   tgtttttcccgctcatgaatattgctctcgccttcaatctcctcaccgagttcggatgtg 67
           |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 107 tgtttttccctctcatgaatattgctctcgccttccatctcctcaccgagttcggatgtg 48

                                                          
Query: 68  gctacgttgtcctgaactactgctttaatcttcatccgcgtttactc 114
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47  gctacgttgtcctgaactactgctttaatcttcatccgcgtttactc 1


>gnl|LJGI|TC68750 UniRef100_A8W458 Cluster: DUF593-2 protein; n=1; Lotus
           japonicus|Rep: DUF593-2 protein - Lotus japonicus,
           complete
          Length = 1226

 Score =  109 bits (55), Expect = 1e-23
 Identities = 73/79 (92%)
 Strand = Plus / Plus

                                                                       
Query: 2   tgctgttgtttttcccgctcatgaatattgctctcgccttcaatctcctcaccgagttcg 61
           ||||| || ||||||| ||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 188 tgctgctgcttttccctctcatgaatttcgctctcgccttcaatctcctcaccgagttcg 247

                              
Query: 62  gatgtggctacgttgtcct 80
           |||||||||||||| ||||
Sbjct: 248 gatgtggctacgttctcct 266