Miyakogusa Predicted Gene
- Lj0g3v0294479.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0294479.1 tr|Q6AUH8|Q6AUH8_ORYSJ Os05g0145400 protein
OS=Oryza sativa subsp. japonica GN=OSJNBb0015A05.6 PE=2
,39.83,5e-18,seg,NULL; VERNALIZATION-INSENSITIVE PROTEIN
3,NULL,CUFF.19729.1
(1902 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC596087 similar to UniRef100_A7NUL4 Cluster: Chromosom... 967 0.0
gnl|LJGI|TC73977 similar to UniRef100_A7NUL4 Cluster: Chromosome... 557 e-158
gnl|LJGI|BP076049 weakly similar to UniRef100_A7NUL4 Cluster: Ch... 206 4e-52
>gnl|LJGI|DC596087 similar to UniRef100_A7NUL4 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (20%)
Length = 492
Score = 967 bits (488), Expect = 0.0
Identities = 491/492 (99%)
Strand = Plus / Plus
Query: 865 ctggatcatgtatatgctaggatgactcgtggaattgtgagtaggctgtcatgtggtgca 924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctggatcatgtatatgctaggatgactcgtggaattgtgagtaggctgtcatgtggtgca 60
Query: 925 gaggtccagaagttgtgctctactgcagttgaatgttatgattcaaagttttctgacctc 984
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaggtccagaagttgtgctctactgcagttgaatgttatgattcaaagttttctgacctc 120
Query: 985 tcctccaattctgcagaaaagcaaaatgcaccaattattgctgataacagatatggaagc 1044
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcctccaattctgcagaaaagcaaaatgcaccaattattgctgataacagatatggaagc 180
Query: 1045 ttagatggatcacaccaagtcccatccctcgcatgctctatacgttttgaagagtgtctt 1104
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttagatggatcacaccaagtcccatccctcgcatgctctatacgttttgaagagtgtctt 240
Query: 1105 cctacctcagtggtcattgtactagaatataatgagaaacttccaaagaactttctgggc 1164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cctacctcagtggtcattgtactagaatataatgagaaacttccaaagaactttctgggc 300
Query: 1165 tgcaggctttggcaccgagtatcaacaacggactacccagagcaacccaccttcattgtc 1224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgcaggctttggcaccgagtatcaacaacggactacccagagcaacccaccttcattgtc 360
Query: 1225 ctgaggcctgagaaaagattcaagctagaaaacctccattcctcaactgagtacttttgc 1284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctgaggcctgagaaaagattcaagctagaaaacctccattcctcaactgagtacttttgc 420
Query: 1285 aaggcttctctgtttagcagcacagagactttgggtgctgcagaagctaaatgggtgaca 1344
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 421 aaggcttctctgtttagcagcacagagactttgggtgctgcaaaagctaaatgggtgaca 480
Query: 1345 cctagtgaatcc 1356
||||||||||||
Sbjct: 481 cctagtgaatcc 492
>gnl|LJGI|TC73977 similar to UniRef100_A7NUL4 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 534
Score = 557 bits (281), Expect = e-158
Identities = 281/281 (100%)
Strand = Plus / Plus
Query: 1622 ttgaaatgagacggatcactggtttgaattctcgaaagcgctcccgggaaaacgattacg 1681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgaaatgagacggatcactggtttgaattctcgaaagcgctcccgggaaaacgattacg 60
Query: 1682 agtattctgtcagggtggtcaaattgctagagcatcaagggcacatagatgagatcttca 1741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agtattctgtcagggtggtcaaattgctagagcatcaagggcacatagatgagatcttca 120
Query: 1742 gggtgaaatttctcacatggttcagcctcaaggctactcagcaggagagaagggtggtca 1801
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gggtgaaatttctcacatggttcagcctcaaggctactcagcaggagagaagggtggtca 180
Query: 1802 gtgcttttgttgatgcattgattgatgacccagcaagcttagctgaccagctcatacata 1861
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtgcttttgttgatgcattgattgatgacccagcaagcttagctgaccagctcatacata 240
Query: 1862 ctttctctgatgagataggctgtgagcaaaaatcttagtga 1902
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctttctctgatgagataggctgtgagcaaaaatcttagtga 281
>gnl|LJGI|BP076049 weakly similar to UniRef100_A7NUL4 Cluster: Chromosome chr18
scaffold_1, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_1, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (6%)
Length = 290
Score = 206 bits (104), Expect = 4e-52
Identities = 111/112 (99%), Gaps = 1/112 (0%)
Strand = Plus / Plus
Query: 697 aggacatggagaaagcaattattgattgcaaaagaagcaagaagagtggatatactctct 756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 aggacatggagaaagcaattattgattgcaaaagaagcaagaagagtggatatactctct 238
Query: 757 ttgcgaatatccttggcccaaagaattctcgtagga-aaagaaatctacaag 807
|||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 239 ttgcgaatatccttggcccaaagaattctcgtaggacaaagaaatctacaag 290