Miyakogusa Predicted Gene

Lj0g3v0294369.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0294369.2 Non Chatacterized Hit- tr|I1LWH8|I1LWH8_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,88.42,0,Exo70,Exo70
exocyst complex subunit; EXOCYST COMPLEX PROTEIN EXO70,NULL; EXOCYST
COMPLEX PROTEIN EXO,CUFF.19719.2
         (780 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV420448 similar to UniRef100_Q9FHC6 Cluster: Emb|CAB83...   103   2e-21
gnl|LJGI|TC70529 similar to UniRef100_A7QHV3 Cluster: Chromosome...    56   3e-07

>gnl|LJGI|AV420448 similar to UniRef100_Q9FHC6 Cluster: Emb|CAB83315.1; n=1;
           Arabidopsis thaliana|Rep: Emb|CAB83315.1 - Arabidopsis
           thaliana (Mouse-ear cress), partial (8%)
          Length = 376

 Score =  103 bits (52), Expect = 2e-21
 Identities = 52/52 (100%)
 Strand = Plus / Minus

                                                               
Query: 729 tctgttgcctgcttatagatctttccttaaacgttttgggcctatgattgag 780
           ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 tctgttgcctgcttatagatctttccttaaacgttttgggcctatgattgag 325


>gnl|LJGI|TC70529 similar to UniRef100_A7QHV3 Cluster: Chromosome undetermined
           scaffold_100, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_100,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (30%)
          Length = 988

 Score = 56.0 bits (28), Expect = 3e-07
 Identities = 152/192 (79%), Gaps = 1/192 (0%)
 Strand = Plus / Plus

                                                                       
Query: 349 gatggaaaatcaaaacaatataaagacccagcattaacccagttgtttcttatgaacaat 408
           ||||| |||||||| || |||| |||||  ||||| || ||  | ||||| |||||||||
Sbjct: 80  gatggtaaatcaaagcagtatagagaccaggcattgacacatctttttctcatgaacaat 139

                                                                       
Query: 409 atccattacatagtgagatctgtgagaaggtcagaggcaaaggacatgctgggagatgat 468
           || ||||| || || ||||| ||  | ||||| || || |||||  |||| || ||||||
Sbjct: 140 attcattatattgtcagatcagttcggaggtctgaagcgaaggat-tgctaggggatgat 198

                                                                       
Query: 469 tgggtacaaatacacagaagaattgtgcaacaacatgcaaatcagtataaaaggatctct 528
           |||||||||   ||||||||  |||||||||| ||||| ||||| || ||||| |   ||
Sbjct: 199 tgggtacaacggcacagaagggttgtgcaacagcatgctaatcaatacaaaagaaatgct 258

                       
Query: 529 tgggcgaagatt 540
           ||||||||||||
Sbjct: 259 tgggcgaagatt 270