Miyakogusa Predicted Gene

Lj0g3v0294299.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0294299.2 Non Chatacterized Hit- tr|A5BST0|A5BST0_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,47.24,2e-18,DUF4137,Putative sodium bile acid cotransporter; GB
DEF: HYPOTHETICAL PROTEIN F18O21_120,NULL; FAMIL,CUFF.19705.2
         (351 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC77005 similar to UniRef100_A7QLK0 Cluster: Chromosome...   525   e-149
gnl|LJGI|BP084266                                                     155   2e-37

>gnl|LJGI|TC77005 similar to UniRef100_A7QLK0 Cluster: Chromosome undetermined
           scaffold_119, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_119,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (18%)
          Length = 479

 Score =  525 bits (265), Expect = e-149
 Identities = 265/265 (100%)
 Strand = Plus / Plus

                                                                       
Query: 87  ctggagtctttcaattatctccggtggtagaaattccgttttttcccgtcgagaaaatgc 146
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ctggagtctttcaattatctccggtggtagaaattccgttttttcccgtcgagaaaatgc 60

                                                                       
Query: 147 caatgctctcatacttgttgcaagccagaaaacattaccagtaatggtagcagtgataga 206
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  caatgctctcatacttgttgcaagccagaaaacattaccagtaatggtagcagtgataga 120

                                                                       
Query: 207 gacccttcatggtgcatttggagaatctgggctgctggttcttccttgtatagcagcaca 266
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gacccttcatggtgcatttggagaatctgggctgctggttcttccttgtatagcagcaca 180

                                                                       
Query: 267 tctaaaccaggttattgtggactcttttctcgttaacttcttgcgtcccagagtagattc 326
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tctaaaccaggttattgtggactcttttctcgttaacttcttgcgtcccagagtagattc 240

                                    
Query: 327 caataaggtcaaagtggcttaagta 351
           |||||||||||||||||||||||||
Sbjct: 241 caataaggtcaaagtggcttaagta 265


>gnl|LJGI|BP084266 
          Length = 372

 Score =  155 bits (78), Expect = 2e-37
 Identities = 78/78 (100%)
 Strand = Plus / Minus

                                                                       
Query: 274 caggttattgtggactcttttctcgttaacttcttgcgtcccagagtagattccaataag 333
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 caggttattgtggactcttttctcgttaacttcttgcgtcccagagtagattccaataag 233

                             
Query: 334 gtcaaagtggcttaagta 351
           ||||||||||||||||||
Sbjct: 232 gtcaaagtggcttaagta 215