Miyakogusa Predicted Gene

Lj0g3v0294269.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0294269.1 tr|G7KIG4|G7KIG4_MEDTR Resistance protein
OS=Medicago truncatula GN=MTR_6g072540 PE=4
SV=1,28,0.00000003,NB-ARC,NB-ARC; TIR,Toll/interleukin-1 receptor
homology (TIR) domain; Toll/Interleukin receptor TIR ,CUFF.19718.1
         (1638 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP076169 similar to UniRef100_A6ZU19 Cluster: Ca2+-tran...   228   9e-59
gnl|LJGI|DC599828 weakly similar to UniRef100_A7PQ23 Cluster: Ch...    74   3e-12
gnl|LJGI|TC78027 weakly similar to UniRef100_Q19PJ3 Cluster: TIR...    60   5e-08
gnl|LJGI|TC74331 weakly similar to UniRef100_A7PQ07 Cluster: Chr...    58   2e-07
gnl|LJGI|TC78835 similar to UniRef100_A8VXI4 Cluster: Envelope g...    54   3e-06

>gnl|LJGI|BP076169 similar to UniRef100_A6ZU19 Cluster: Ca2+-translocating ATPase; n=1;
            Saccharomyces cerevisiae YJM789|Rep: Ca2+-translocating,
            partial (1%)
          Length = 392

 Score =  228 bits (115), Expect = 9e-59
 Identities = 118/119 (99%)
 Strand = Plus / Minus

                                                                        
Query: 1520 acatgtctggattttcctatactgccgggtatgaatataaatttatccaagacaaggtgg 1579
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392  acatgtctggattttcctatactgccgggtatgaatataaatttatccaagacaaggtgg 333

                                                                       
Query: 1580 aaagggccaataatatcaaaaaatatgacttgtatttacaaagctgggatatggactag 1638
            ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 332  aaagggccaataatatcaaaaaatatgacttgtatttaccaagctgggatatggactag 274


>gnl|LJGI|DC599828 weakly similar to UniRef100_A7PQ23 Cluster: Chromosome chr18
            scaffold_24, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome chr18 scaffold_24, whole genome
            shotgun sequence - Vitis vinifera (Grape), partial (21%)
          Length = 539

 Score = 73.8 bits (37), Expect = 3e-12
 Identities = 192/243 (79%), Gaps = 3/243 (1%)
 Strand = Plus / Plus

                                                                        
Query: 998  gtcaaggattacctggtagaatcaaagatgtgggaacttccttaaaaggtgaaccgattg 1057
            ||||||| |||| ||||| ||| |||||||||||| |||||||| || || |||| ||||
Sbjct: 1    gtcaagggttacttggtacaattaaagatgtgggatcttccttacaatgtcaacccattg 60

                                                                        
Query: 1058 agcattggaatgagttactaaacagtttgaggcattcaatggcgcgctaccagatttata 1117
            || | ||||| |  ||| || | || ||||| |||||   ||| |||||||| || | | 
Sbjct: 61   aggagtggaaagcattaatagatagcttgagacattc---ggctcgctaccaaatctttc 117

                                                                        
Query: 1118 tcagctttagaggagaggataccggctgctcttttgccggctatctctaccgggcgttgt 1177
            |||||||||| ||||| |||||  ||| ||||||| | || | ||||||    ||  |||
Sbjct: 118  tcagctttaggggagatgatactcgctactcttttactggttctctctatgatgctctgt 177

                                                                        
Query: 1178 gccgggagggattcaagacctttatggatgacgggagactggaaggtggagacgaaattt 1237
            |||| ||||||||||||||||| |||||||| ||| || |||| ||||| ||| | ||||
Sbjct: 178  gccgagagggattcaagaccttcatggatgatgggggattggagggtggcgaccagattt 237

               
Query: 1238 cac 1240
            |||
Sbjct: 238  cac 240


>gnl|LJGI|TC78027 weakly similar to UniRef100_Q19PJ3 Cluster: TIR-NBS-LRR type disease
            resistance protein; n=1; Populus trichocarpa|Rep:
            TIR-NBS-LRR type disease resistance protein - Populus
            trichocarpa (Western balsam poplar) (Populus
            balsamiferasubsp. trichocarpa), partial (8%)
          Length = 1162

 Score = 60.0 bits (30), Expect = 5e-08
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                              
Query: 1475 ctgagaaagtgcaaagatggaggtcaactttgtc 1508
            ||||||||||||||| ||||||||||||||||||
Sbjct: 924  ctgagaaagtgcaaaaatggaggtcaactttgtc 957



 Score = 54.0 bits (27), Expect = 3e-06
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                               
Query: 1270 aggctctcgattgttgttttctctcaaaactatgc 1304
            ||||| |||||||||||||||||| ||||||||||
Sbjct: 719  aggctttcgattgttgttttctctgaaaactatgc 753


>gnl|LJGI|TC74331 weakly similar to UniRef100_A7PQ07 Cluster: Chromosome chr18
            scaffold_24, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome chr18 scaffold_24, whole genome
            shotgun sequence - Vitis vinifera (Grape), partial (10%)
          Length = 811

 Score = 58.0 bits (29), Expect = 2e-07
 Identities = 53/61 (86%)
 Strand = Plus / Plus

                                                                        
Query: 1372 gtttggccaattttttacaaagtggaaccgactgatataagacatcagaaaaataattat 1431
            ||||||||||| ||||| |||||||||||  | ||| ||||| |||||||||||| ||||
Sbjct: 318  gtttggccaatcttttataaagtggaaccatcagatgtaagatatcagaaaaatagttat 377

             
Query: 1432 g 1432
            |
Sbjct: 378  g 378


>gnl|LJGI|TC78835 similar to UniRef100_A8VXI4 Cluster: Envelope glycoprotein; n=1;
           Human immunodeficiency virus 1|Rep: Envelope
           glycoprotein - Human immunodeficiency virus 1, partial
           (7%)
          Length = 663

 Score = 54.0 bits (27), Expect = 3e-06
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 105 tgaaaaggagaagctgatttcaaatct 131
           |||||||||||||||||||||||||||
Sbjct: 150 tgaaaaggagaagctgatttcaaatct 176